[Jmol-developers] [ jmol-Feature Requests-2779223 ] Functional Group Identification

2009-04-23 Thread SourceForge.net
Feature Requests item #2779223, was opened at 2009-04-23 07:41 Message generated for change (Comment added) made by aherraez You can respond by visiting: https://sourceforge.net/tracker/?func=detailatid=379136aid=2779223group_id=23629 Please note that this message will contain a full copy of the

[Jmol-developers] [ jmol-Feature Requests-2779224 ] Export to Vrml etc

2009-04-23 Thread SourceForge.net
Feature Requests item #2779224, was opened at 2009-04-23 07:47 Message generated for change (Comment added) made by aherraez You can respond by visiting: https://sourceforge.net/tracker/?func=detailatid=379136aid=2779224group_id=23629 Please note that this message will contain a full copy of the

[Jmol-developers] can DATA append to current model?

2009-04-23 Thread Angel Herráez
The use of DATA to provide a model inline in a script deletes the existing model. I was wandering if there is a way to add atoms to the current model. I have found that I can do DATA first, then LOAD APPEND (with or without set appendNew), but not the other way round. Maybe data append could be

[Jmol-developers] [ jmol-Feature Requests-2779223 ] Functional Group Identification

2009-04-23 Thread SourceForge.net
Feature Requests item #2779223, was opened at 2009-04-23 06:41 Message generated for change (Comment added) made by mykc You can respond by visiting: https://sourceforge.net/tracker/?func=detailatid=379136aid=2779223group_id=23629 Please note that this message will contain a full copy of the

Re: [Jmol-developers] can DATA append to current model?

2009-04-23 Thread Robert Hanson
That should work already -- I guess it's not documented. It's data append ... end append 2009/4/23 Angel Herráez angel.herr...@uah.es The use of DATA to provide a model inline in a script deletes the existing model. I was wandering if there is a way to add atoms to the current model. I

Re: [Jmol-developers] can DATA append to current model?

2009-04-23 Thread Angel Herráez
On 23 Apr 2009 at 11:53, Robert Hanson wrote: That should work already -- I guess it's not documented. It's data append Aha! I tried data append model example and the parser complained of too many arguments Thanks! Mmmm... it's not working well. I load a model, with 37 atoms. The

[Jmol-developers] [ jmol-Feature Requests-2779223 ] Functional Group Identification

2009-04-23 Thread SourceForge.net
Feature Requests item #2779223, was opened at 2009-04-23 00:41 Message generated for change (Comment added) made by hansonr You can respond by visiting: https://sourceforge.net/tracker/?func=detailatid=379136aid=2779223group_id=23629 Please note that this message will contain a full copy of the

[Jmol-developers] [ jmol-Feature Requests-2779223 ] Functional Group Identification

2009-04-23 Thread SourceForge.net
Feature Requests item #2779223, was opened at 2009-04-23 00:41 Message generated for change (Comment added) made by hansonr You can respond by visiting: https://sourceforge.net/tracker/?func=detailatid=379136aid=2779223group_id=23629 Please note that this message will contain a full copy of the

[Jmol-developers] [ jmol-Feature Requests-2779223 ] Functional Group Identification

2009-04-23 Thread SourceForge.net
Feature Requests item #2779223, was opened at 2009-04-23 06:41 Message generated for change (Comment added) made by mykc You can respond by visiting: https://sourceforge.net/tracker/?func=detailatid=379136aid=2779223group_id=23629 Please note that this message will contain a full copy of the

Re: [Jmol-developers] can DATA append to current model?

2009-04-23 Thread Robert Hanson
check model 2 2009/4/23 Angel Herráez angel.herr...@uah.es On 23 Apr 2009 at 11:53, Robert Hanson wrote: That should work already -- I guess it's not documented. It's data append Aha! I tried data append model example and the parser complained of too many arguments Thanks!

[Jmol-developers] [ jmol-Feature Requests-2779223 ] Functional Group Identification

2009-04-23 Thread SourceForge.net
Feature Requests item #2779223, was opened at 2009-04-23 00:41 Message generated for change (Comment added) made by hansonr You can respond by visiting: https://sourceforge.net/tracker/?func=detailatid=379136aid=2779223group_id=23629 Please note that this message will contain a full copy of the

Re: [Jmol-developers] [Jmol-users] jmol freezes

2009-04-23 Thread Robert Hanson
OK, I can reproduce this problem even at http://chemapps.stolaf.edu/jmol/docs/examples-11/new.htm The problem: After a few script invocations, specifically with the Mac OS, the applet appears to not be responding. A page resize starts it up again. In actuality, the scripts are working fine. it's

Re: [Jmol-developers] [Jmol-users] jmol freezes

2009-04-23 Thread Robert Hanson
OK, I have an idea. Is it possible that the problem only arises when the page the browser is opening has an applet that is not fully visible on the page -- down further on the page perhaps, or just a bit too large? That could be why we've missed this. It looks to me like the effect is only when

Re: [Jmol-developers] can DATA append to current model?

2009-04-23 Thread Angel Herráez
On 23 Apr 2009 at 15:57, Robert Hanson wrote: check model 2 Oh, right. The problem was that the pop-up menu says only one model, and the frame forward/back buttons in the app toolbar don't work either. After I typed frame 2 in the console, now the menu says 2 models But the back menu in the

Re: [Jmol-developers] [Jmol-users] jmol freezes

2009-04-23 Thread Dean Johnston
I was able to reproduce this problem with my pages (symmetry.otterbein.edu) on OS X 10.5.6, using both Firefox 3.0.9 and Safari 4 (public beta 5528.16). It seem to happen much more often (almost always) with Firefox, but Safari eventually froze after lots of activity. With Firefox, Jmol came

Re: [Jmol-developers] [Jmol-users] jmol freezes

2009-04-23 Thread Robert Hanson
http://chemapps.stolaf.edu/jmol/docs/examples-11/testmac.htm On Thu, Apr 23, 2009 at 11:32 PM, Robert Hanson hans...@stolaf.edu wrote: I have put up a test page at (see above) There's an applet way down the page. A spinning animation is invoked with the testmac link. A steady stream of