[MARMAM] New article: Vibrissal growth parameters of southern elephant seals Mirounga leonina

2017-01-05 Thread Nico Lubcker
Dear colleagues,

My co-authors and I would like to share with you our work recently
published in Marine Ecology Progress Series:

Lübcker N, Condit R, Beltran RS, de Bruyn PJN, Bester MN. 2016. Vibrissal
growth parameters of southern elephant seals Mirounga leonina: obtaining
fine-scale, time-based stable isotope data. Marine Ecology Progress Series
559: 243-255. doi: 10.3354/meps11899.

Article available at http://www.int-res.com/abstracts/meps/v559/p243-255/


ABSTRACT: Stable isotopes provide a powerful, indirect approach to assess
the trophic ecology of individuals on a spatial and temporally integrated
basis (especially when combined with telemetry). However, using stable
isotopes requires accurate, species-specific quantification of the period
of biomolecule deposition in the sampled tissue. Sequentially sampled
vibrissae (whiskers) provide a chronology of biogeochemical data, although
knowledge of vibrissal growth is required for temporal interpretations. We
sampled vibrissae from southern elephant seals Mirounga leonina (hereafter
SES) at Marion Island, southern Indian Ocean, to address the following
aims: (1) define the prevalence and timing of their vibrissal replacement,
(2) determine the vibrissal regrowth rate and temporal resolution of
isotopic data captured along the length of sequentially sampled vibrissae,
and (3) explore assumptions regarding their vibrissal growth. Contrary to
the previously described asynchronous vibrissal shedding pattern of SES,
71.1% of individuals displayed vibrissal shedding during the annual pelage
moult. Furthermore, vibrissal growth ceased once the asymptotic length was
reached, and the vibrissae were retained before being replaced. Vibrissae
with known growth histories were resampled at multiple known intervals to
control for unknown growth starting dates. Vibrissae followed a von
Bertalanffy growth function as the growth rate decreased near the
asymptotic length. The resolution of the isotopic data obtainable per 2 mm
section ranged from 3.5 d at the vibrissal tip to >40 d at the base. Using
these defined growth rates and shedding patterns, researchers can
prudently apply timestamps to stable isotope values along vibrissae.


https://www.researchgate.net/publication/310330776_Vibrissal_growth_parameters_of_southern_elephant_seals_Mirounga_leonina_Obtaining_fine-scale_time-based_stable_isotope_data

Sincerely,
Nico Lubcker
nlubc...@zoology.up.ac.za
PhD Zoology Candidate
Mammal Research Institute
Department of Zoology and Entomology
University of Pretoria
South Africa





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[MARMAM] New article: Juvenile southern elephant seals from Marion Island consume krill: a stable isotope investigation using whisker regrowths

2017-08-21 Thread Nico Lubcker
Dear colleagues,

My co-authors and I would like to share with you our work recently
published in Marine Ecology Progress Series:

Lübcker N, Reisinger RR, Oosthuizen WC, de Bruyn PJN, van Tonder A,
Pistorius PA, Bester MN. 2017. Low trophic level diet of juvenile southern
elephant seals Mirounga leonina from Marion Island: a stable isotope
investigation using vibrissal regrowths. Mar Ecol Prog Ser 577: 237–250.

Article available at https://doi.org/10.3354/meps12240.

ABSTRACT:
Insight into the trophic ecology of marine predators is vital for
understanding their ecosystem role and predicting their responses to
environmental change. Juvenile southern elephant seals (SES) Mirounga
leonina are considered generalist predators within the Southern Ocean.
Although mesopelagic fish and squid dominate their stomach lavage samples,
the stable isotope profile captured along the length of sampled vibrissae
of young SES at Macquarie Island, southwest Pacific Ocean (54.5° S, 158.9°
E) recently emphasized the contribution of crustaceans to their diet
(likely Euphausia superba). Herein, we used the stable isotope values of
sampled vibrissal regrowths with known growth histories to assess the diet
of juvenile SES at Marion Island, southern Indian Ocean (46.8° S, 37.8° E)
on a temporally integrated basis. We specifically aimed to
quantify the possible contribution of crustaceans to the diet of juvenile
SES. Sequentially (chronologically) sampled vibrissal regrowths of 14
juvenile SES produced fine-scale dietary information spanning up to 9 mo.
The depleted stable isotope signatures of nitrogen (d15N) (8.5 ±
0.6‰) and carbon (d13C) (-20.3 ± 0.1‰) measured during the
period of independent foraging suggested the use of a lower trophic level
diet within the Polar Frontal Zone. A mixing model predicted that up to
76% of juvenile SES diet comprised crustaceans, consisting of 2 crustacean
groups, each contributing 26% (credible interval, CI: 13 - 39%) and 50%
(CI: 35 - 64%) to their diets, presumably representing subantarctic krill
species. This first utilisation of the isotopic signature captured along
the length of vibrissal regrowths confirms the inclusion and importance of
crustaceans in the diet of juvenile SES.

See
(https://www.researchgate.net/project/Low-trophic-level-diet-of-juvenile-southern-elephant-seals-Mirounga-leonina-from-Marion-Island-a-stable-isotope-investigation-using-vibrissal-regrowths/)
for more information regarding this project, or
(http://www.marionseals.com/) for more information regarding our research
group.

Sincerely,
Nico Lubcker
PhD. Zoology Candidate
Mammal Research Institute
Old Botany Building Room 1.16.5
Department of Zoology and Entomology
University of Pretoria
Hatfield
South Africa
0028
Cell: + 27 72 0370130







 Original Message 
Subject: New article: Vibrissal growth parameters of southern elephant
seals Mirounga leonina
From:"Nico Lubcker" <nlubc...@zoology.up.ac.za>
Date:Thu, January 5, 2017 09:35
To:  "marmam@lists.uvic.ca" <marmam@lists.uvic.ca>
--

Dear colleagues,

My co-authors and I would like to share with you our work recently
published in Marine Ecology Progress Series:

Lübcker N, Condit R, Beltran RS, de Bruyn PJN, Bester MN. 2016. Vibrissal
growth parameters of southern elephant seals Mirounga leonina: obtaining
fine-scale, time-based stable isotope data. Marine Ecology Progress Series
559: 243-255. doi: 10.3354/meps11899.

Article available at http://www.int-res.com/abstracts/meps/v559/p243-255/


ABSTRACT: Stable isotopes provide a powerful, indirect approach to assess
the trophic ecology of individuals on a spatial and temporally integrated
basis (especially when combined with telemetry). However, using stable
isotopes requires accurate, species-specific quantification of the period
of biomolecule deposition in the sampled tissue. Sequentially sampled
vibrissae (whiskers) provide a chronology of biogeochemical data, although
knowledge of vibrissal growth is required for temporal interpretations. We
sampled vibrissae from southern elephant seals Mirounga leonina (hereafter
SES) at Marion Island, southern Indian Ocean, to address the following
aims: (1) define the prevalence and timing of their vibrissal replacement,
(2) determine the vibrissal regrowth rate and temporal resolution of
isotopic data captured along the length of sequentially sampled vibrissae,
and (3) explore assumptions regarding their vibrissal growth. Contrary to
the previously described asynchronous vibrissal shedding pattern of SES,
71.1% of individuals displayed vibrissal shedding during the annual pelage
moult. Furthermore, vibrissal growth ceased once the asymptotic length was
reached, and the vibrissae were retained before being replaced. Vibrissae
with known growth histories were resampled at multiple known intervals to
con

[MARMAM] Article. Steroid extraction from whiskers: Publication of novel 'method'

2020-02-24 Thread Nico Lubcker
Dear colleagues,

We are pleased to announce the publication of the Marion Island Marine
Mammal Programme (MIMMP's) latest paper: “What’s in a whisker?
High-throughput analysis of twenty-eight C19 and C21 steroids in mammalian
whiskers by ultra-performance convergence chromatography-tandem mass
spectrometry”.

Herein, we developed a novel method to analyze multiple steroids deposited
chronologically along the length of seal whiskers. The manuscript describes
an accurate quantification method for multiple steroids, measured in a
single chromatography step which reduces the cost and time associated with
the analyses. The advance of this method can contribute to our
understanding of the impact of stress associated with environmental/climate
changes that affect the health and survival of organisms, as well as to
delineate the reproductive cycles of free-living mammals with cryptic life
stages.


I trust that the readership of this mailing list will find the manuscript
of interest.


https://www.sciencedirect.com/science/article/abs/pii/S1570023219316642?fbclid=IwAR0_9tajNPrR9JlBcM_62k1TW6_qp5eIQhv3nVaDfHpF1HPvzBPwPJ73NL4

https://www.researchgate.net/publication/339227340_What's_in_a_whisker_High-throughput_analysis_of_twenty-eight_C19_and_C21_steroids_in_mammalian_whiskers_by_ultra-performance_convergence_chromatography-tandem_mass_spectrometry

Sincerely,
Nico Lubcker
PhD. Zoology Candidate
Mammal Research Institute, Department of Zoology and Entomology,
University of Pretoria

https://www.researchgate.net/profile/Nico_Luebcker
marionseals.com/people/
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[MARMAM] MARMAM submission, New Publication: Fasting affects amino acid nitrogen isotope values: a new tool for identifying nitrogen balance of free-ranging mammals

2020-04-18 Thread Nico Lubcker
Dear Marmamers,

My co-authors and I are pleased to announce our new publication in
*Oecologia*.

Lübcker, N., Whiteman, J.P., Millar, R.P. et al. Fasting affects amino acid
nitrogen isotope values: a new tool for identifying nitrogen balance of
free-ranging mammals. Oecologia (2020).
https://doi.org/10.1007/s00442-020-04645-5

Please take care of yourselves and each other during this difficult time.

Abstract
Changes in the nutritional status of free-ranging animals have a strong
influence on individual fitness, yet it remains challenging to monitor
longitudinally. Nitrogen (δ15N) and carbon (δ13C) isotope values measured
chronologically along the length of metabolically inert keratinous tissues
can be used as a nutritional biomarker to retrospectively reconstruct the
foraging ecology and eco-physiology of consumers. We quantitatively
describe the physiological effects of fasting on amino acid metabolism
using sequentially measured bulk tissue and amino acid δ15N values along
the length of whiskers sampled from free-ranging juvenile, subadults, adult
female, and male southern elephant seals (SES; Mirounga leonina) on Marion
Island in the Southern Ocean. For both juveniles and adult females, whisker
segments representing fasting had significantly higher bulk tissue δ15N
values of 0.6 ± 0.5‰ and 1.3–1.8‰, respectively, in comparison to segments
unaffected by fasting. We also found a large increase (2–6‰) in δ15N values
for most glucogenic amino acids and a simultaneous depletion (2–3‰) of
alanine in segments reflecting fasting, which enabled us to accurately
predict (74%) the nutritional status of our model species. We hypothesize
that the glucose-alanine cycle is the mechanism driving the observed
depletion of alanine δ15N values during fasting. We demonstrated that
keratinaceous tissues can be used as a longitudinal nutritional biomarker
to detect changes in the nitrogen balance of an individual. Moreover, it is
evident that physiological factors have an important influence on tissue
δ15N values and can lead to erroneous bulk tissue or amino acid
isotope-based reconstructions of foraging habits.

https://www.researchgate.net/publication/340684991_Fasting_affects_amino_acid_nitrogen_isotope_values_a_new_tool_for_identifying_nitrogen_balance_of_free-ranging_mammals


Thank you
Sincerely,
Nico Lubcker
PhD. Zoology Candidate
Mammal Research Institute, Department of Zoology and Entomology,
University of Pretoria

https://www.researchgate.net/profile/Nico_Luebcker
marionseals.com/people/
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[MARMAM] MARMAM submission, New Publication: What’s in a whisker? High-throughput analysis of twenty-eight C19 and C21 steroids in mammalian whiskers by ultra-performance convergence chromatography-ta

2020-04-18 Thread Nico Lubcker
Dear Marmamers,

My co-authors and I are pleased to announce our new publication in *Journal
of Chromatography B*.

Lübcker N, Bloem LM, du Toit T, Swart P, de Bruyn PN, Swart AC, Millar RP.
What’s in a whisker? High-throughput analysis of twenty-eight C19 and C21
steroids in mammalian whiskers by ultra-performance convergence
chromatography-tandem mass spectrometry. Journal of Chromatography B. 2020
Mar 15;1141:122028.
https://doi.org/10.1016/j.jchromb.2020.122028

Please take care and shout if I can be of assistance.

*Highlights*
• We developed a high-throughput assay to quantify 28 steroids from single
whiskers.

•This UPC2-MS/MS method enabled the first quantification of a suite of
steroids detectable in mammalian whiskers.

•Sensitive and accurate quantification method at reduced cost and time.

•Whiskers provides biomatrix for longitudinal steroid hormones monitoring.

•Applicable to free-ranging mammals with cryptic life cycles.


*Abstract*
Obtaining longitudinal endocrinological data from free-ranging animals
remains challenging. Steroid hormones can be extracted sequentially from
non-invasively sampled biologically inert keratinous tissues, such as
feathers, nails, hair and whiskers. However, uncertainty regarding the type
and levels of steroids incorporated into such tissues complicates their
utility in wildlife studies. Here, we developed a novel, comprehensive
method to analyze fourteen C19 and fourteen C21 steroids deposited
chronologically along the length of seal whiskers in a single, 6-minute
chromatographic step, using ultra-performance convergence
chromatography-tandem mass spectrometry. The limits of detection and
quantification ranged from 0.01 to 2 ng/mL and from 0.1 to 10 ng/mL,
respectively. The accuracy and precision were within acceptable limits for
steroids at concentrations ≥2 ng/mL. The recovery (mean = 107.5% at 200
ng/mL), matrix effect and process efficiency of steroids evaluated, using
blanked whisker matrix samples, were acceptable. The method was applied to
the analysis of steroid hormone levels in adult female whisker segments
obtained from southern elephant seals (Mirounga leonina), n = 10, and two
fur seal species, Antarctic fur seals (Arctocephalus gazella; n = 5) and
subantarctic fur seals (Arctocephalus tropicalis; n = 5), sampled between
2012 and 2017. In the whisker subsamples analyzed (n = 71), the median
concentration of steroid hormones detected above the LOQ ranged from 2.0 to
273.7 pg/mg. This was the first extraction of multiple C19 and C21
steroids, including their C11-oxy metabolites, from the whiskers of
mammals. Measuring hormones sequentially along the whisker lengths can
contribute to our understanding of the impact of stress associated with
environmental/climate changes that affect the health, survival of
organisms, as well as to delineate the reproductive cycles of free-living
mammals with cryptic life stages.

https://www.researchgate.net/publication/339227340_What's_in_a_whisker_High-throughput_analysis_of_twenty-eight_C19_and_C21_steroids_in_mammalian_whiskers_by_ultra-performance_convergence_chromatography-tandem_mass_spectrometry


Thank you
Sincerely,
Nico Lubcker
PhD. Zoology Candidate
Mammal Research Institute, Department of Zoology and Entomology,
University of Pretoria

https://www.researchgate.net/profile/Nico_Luebcker
marionseals.com/people/
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