Re: [PyMOL] APBS plugin for Sugars

2020-06-17 Thread Mario Garcia Urena
(if feasible, I am brainstorming!) Thanks again for your help and for your help in advance, Mario -Original Message- From: Thomas Holder Sent: Monday, June 15, 2020 9:37 AM To: Mario Garcia Urena Cc: pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] APBS plugin for Sugars Hi

[PyMOL] APBS plugin for Sugars

2020-06-14 Thread Mario Garcia Urena
Hi all, I was trying to generate dipole moments with pymol using the APBS plugin. For proteins I adapted a code and the dipole moments are correct and work just fine, but for sugars it does not. I am well aware that the problem is that many of the residues are not present in the AMBER force