Martin,
It is remarkable that a question like this hasn't come up before, but it
reveals a rather large whole in PyMOL's selection language: though we have
some proximity operators, we are not currently able to select atoms based on
absolute or relative coordinate vector relationships.
So
Am 04.03.2009 um 06:46 schrieb Warren DeLano:
Hey Warren,
It is remarkable that a question like this hasn't come up before,
but it reveals a rather large whole in PyMOL's selection language:
though we have some proximity operators, we are not currently able
to select atoms based on
Hi,
I have a couple of quick notes about your specific application:
This works well when bilayers are flat. So, it works well for small bilayers
and it works well at the beginning of a simulation. For medium to large
bilayers, undulations throughout the simulation will cause this algorithm to
Am 04.03.2009 um 17:32 schrieb Michael Lerner:
Hey Michael
You probably know all of this, but I thought I'd mention it in case
someone was tempted to just take your code and apply it individually
to each frame of a simulation without really thinking about it.
Unfortunately, I've seen