Gents,
I want to try to visualize a retro-enantio Conotoxin peptide (reverse
sequence, all D-amino acids, sculpting) and visually compare surface
charge to its normal L-amino acid counterpart using Pymol. I use Pymol
0.93 (fink compiled) on a Powerbook G4/667 with three-button mouse.
...Mac-mail did not propagate the message from out-folder to
sent-folder for unknown reasons.
Uwe
Heinz-Uwe,
For 0.95:
The inversion function was changed in version 0.95 to take advantage
of multiple picked atoms. To invert a center, Ctrl-middle-click to pick the
center atom as pk1 and two stationary atoms as pk2 and pk3. Then type
Ctrl-E to invert.
For 0.93:
Hey Fellow PyMolers,
I should be able to figure this out but I simply haven't after much
fiddling and googling. I'm trying to create a cell surface for a cover
figure and in Molscript I usually did this by making a PDF file with a
single atom, rendering it in CPK, and then blowing its
Tony,
In order to enter multi-line Python code on the command line, you
need to use explicit end-of-line continuations. Otherwise, PyMOL won't know
where your Python code stops and PyMOL commands again begin.
from pymol.cgo import *
from pymol import cmd
set cgo_sphere_quality, 3
def
