Hi there,
I'm having problems visualising apbs .dx maps in pymol. Pymol (0.97)
and apbs (0.3.1) compile from source fine and run otherwise normally.
apbs_tools launches ok within pymol and the user interface appears fine.
On initiating the calculation, pink dots representing charge
Hi there,
I'm having problems visualising apbs .dx maps in pymol. Pymol (0.97)
and apbs (0.3.1) compile from source fine and run otherwise normally.
apbs_tools launches ok within pymol and the user interface appears fine.
On initiating the calculation, pink dots representing charge
On Mar 23, 2005, at 17:38, Warren DeLano wrote:
Yes, but it is currently awkward because you need to protect the other
atoms
in the object from moving first (action menu - movement - protect on
the
inverse selection), then you can drag the object moving just the atoms
in
the original
On Mar 23, 2005, at 14:14, Antonio Morreale wrote:
I'm new to pymol, and maybe the question is very basic, but I hope to
have your help. I would like to read grids files generated by in house
program, how can I do this within pymol?
If the data is defined on an equidistant grid, and if you can
Hi Hyun-Chul,
It's easy to use PyMOL to build protein fragments in standard geometries
(Build menu in the Tcl/Tk GUI window), but I'm not sure about DNA.
Three non-PyMOL methods that I'm aware of are:
(1) The program B (aka Biomer) from Dave Case's group at Scripps
To add to what Cameron said:
* Cameron Mura cm...@ucsd.edu [2005-03-24 09:44] wrote:
Hi Hyun-Chul,
It's easy to use PyMOL to build protein fragments in standard geometries
(Build menu in the Tcl/Tk GUI window), but I'm not sure about DNA.
Three non-PyMOL methods that I'm aware of are:
is it possible to use the pdb loader in a *.pml style script?
With the shipped plugin it may be hard. I wrote the original, but have
since written a new/improved one that does not tough the filesystem and
adds a remote command that will fetch and load pdbs as well. You can
see the code for
Bill,
I've noticed this happens on some machines (G5 imac) and not others (G5
dual, G4 powerbook, G4 tower). I may be a bug in Panther, since the
problems seems to have been fixed in the Tiger beta, but...well...that's not
out yet. It does seem to depend on whether or not any other programs
