[R] Two way joining vs heatmap

2009-08-31 Thread Schalk Heunis
Hi STATISTICA has a function called Two-way joining (see http://www.statsoft.com/TEXTBOOK/stcluan.html#twotwo) and the reference material states that this is based on the method as published by Hartigan (found this paper: http://www.jstor.org/pss/2284710 through wikipedia). What is the

Re: [R] Two way joining vs heatmap

2009-08-31 Thread Oscar Bayona
Hi all How can I un subscrive this forum? 2009/8/31 Schalk Heunis schalk.heu...@enerweb.co.za Hi STATISTICA has a function called Two-way joining (see http://www.statsoft.com/TEXTBOOK/stcluan.html#twotwo) and the reference material states that this is based on the method as published by

Re: [R] Two way joining vs heatmap

2009-08-31 Thread Peter Dalgaard
Oscar Bayona wrote: Hi all How can I un subscrive this forum? By following the instructions on https://stat.ethz.ch/mailman/listinfo/r-help -- O__ Peter Dalgaard Ă˜ster Farimagsgade 5, Entr.B c/ /'_ --- Dept. of Biostatistics PO Box 2099, 1014 Cph. K (*) \(*) --

Re: [R] Two way joining vs heatmap

2009-08-31 Thread Levi Waldron
Hi Schalk, the heatmap function does not implement two-way joining as far as I know. It clusters rows and columns independently. However if you find or program a method that implements two-way joining, you could use the row and column ordering it returns in your heatmap using the Rowv and Colv

Re: [R] Two way joining vs heatmap

2009-08-31 Thread Schalk Heunis
Levi Thanks for the reply, do you know of any function or package that does contain an implementation of two-way joining? I looked at the biclust package which implements several other (more modern?) bi-clustering techniques, but could not find two-way joining. Schalk Heunis On Mon, Aug