Re: [R] Running a PERL script from R

2007-09-07 Thread Charles C. Berry
/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http

Re: [R] How to obtain parameters of a mixture model of two lognormal distributions

2007-09-07 Thread Charles C. Berry
and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu/faculty/cberry

Re: [R] element wise opertation between a vector and a list

2007-09-05 Thread Charles C. Berry
, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu/faculty/cberry/ La Jolla, San Diego 92093-0901

Re: [R] NAs in indices

2007-09-02 Thread Charles C. Berry
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED

[R] Plot command drops part of the plot for large plots in multiple figure environment

2007-08-29 Thread Lindveld, Charles
= subtitleStr) } Charles Lindveld Centre for Transport Studies Imperial College London [[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http

Re: [R] OT: distribution of a pathological random variate

2007-08-29 Thread Charles C. Berry
, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu/faculty/cberry/ La Jolla, San

Re: [R] logic operation on an array

2007-08-28 Thread Charles C. Berry
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED

Re: [R] data manipulation help

2007-08-28 Thread Charles C. Berry
://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San

Re: [R] use apply function with which

2007-08-27 Thread Charles C. Berry
__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry

Re: [R] read big text file into R

2007-08-23 Thread Charles C. Berry
, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu/faculty/cberry/ La Jolla, San Diego 92093-0901

Re: [R] Exact Confidence Intervals for the Ration of Two Binomial

2007-08-23 Thread Charles C. Berry
@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098

Re: [R] Expedite scalar f(x) evaluation over vectors

2007-08-23 Thread Charles C. Berry
]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098

Re: [R] Output from while and for loop

2007-08-22 Thread Charles C. Berry
-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu

Re: [R] tackle memory insufficiency for large dataset using save() load()??

2007-08-22 Thread Charles C. Berry
() should tell you there are two objects - 'd' and 'newdata' So just continue using 'd', e.g. summary( d ) HTH, Chuck [snip] Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED

Re: [R] stupid question??

2007-08-20 Thread Charles C. Berry
://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San

Re: [R] doubt about string comparison

2007-08-18 Thread Charles C. Berry
mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098

Re: [R] names not inherited in functions

2007-08-17 Thread Charles C. Berry
commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu/faculty/cberry/ La

Re: [R] Linear models over large datasets

2007-08-17 Thread Charles C. Berry
. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu/faculty/cberry/ La Jolla, San Diego 92093-0901

Re: [R] ANOVA: Factorial designs with a separate control

2007-08-15 Thread Charles C. Berry
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED

Re: [R] Q: how to extract coefisients from one glm and implement them in to an other glm?

2007-08-13 Thread Charles C. Berry
]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry

Re: [R] Memory Experimentation: Rule of Thumb = 10-15 Times the Memory

2007-08-09 Thread Charles C. Berry
]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry

Re: [R] Memory Experimentation: Rule of Thumb = 10-15 Times the Memory

2007-08-09 Thread Charles C. Berry
object.size(as.factor(big2))/1e6 [1] 4.001184 big3 - paste(big2,big2,sep='') object.size(big3)/1e6 [1] 36.2 object.size(as.factor(big3))/1e6 [1] 4.001184 On 8/9/07, Charles C. Berry [EMAIL PROTECTED] wrote: On Thu, 9 Aug 2007, Michael Cassin wrote: I really appreciate the advice

Re: [R] Relocating Axis Label/Title --2

2007-08-08 Thread Charles Annis, P.E.
=black, ylab = list(expression(paste(dN/dlogD[agg], [*cm^-3*]))), xlab = expression(paste(D[agg], [nm])), cex.lab=1.2 ) axis(2, mgp=c(0, 0.2, -2)) dev.off() Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original

Re: [R] Relocating Axis Label/Title --2 (Second try.)

2007-08-08 Thread Charles Annis, P.E.
(4.5, 4.5, 1, 1) + 0.1) ### plot(D_mean,y,type=l,yaxt=n,lty=2,lwd=2,col=black, ylab = list(expression(paste(dN/dlogD[agg], [*cm^-3*]))), xlab = expression(paste(D[agg], [nm])), cex.lab=1.2 ) axis(2, mgp=c(0, 0.2, -2)) dev.off() Charles Annis, P.E. [EMAIL PROTECTED] phone: 561

Re: [R] Naming Lists

2007-08-07 Thread Charles C. Berry
://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family

Re: [R] backslash c

2007-08-07 Thread Charles C. Berry
__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry

Re: [R] Mixture of Normals with Large Data

2007-08-04 Thread Charles C. Berry
and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu/faculty

Re: [R] generating symmetric matrices

2007-07-30 Thread Charles C. Berry
@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098

Re: [R] Looping through all possible combinations of cases

2007-07-30 Thread Charles C. Berry
/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http

Re: [R] Matrix Multiplication, Floating-Point, etc.

2007-07-30 Thread Charles C. Berry
, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu/faculty/cberry/ La Jolla, San Diego 92093-0901

Re: [R] Dataframe of factors transform speed?

2007-07-20 Thread Charles C. Berry
code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu/faculty/cberry/ La Jolla, San Diego 92093-0901

Re: [R] Question about acception rejection sampling - NOT R question

2007-07-13 Thread Charles C. Berry
-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu

Re: [R] Power analysis for glm-function

2007-07-13 Thread Charles C. Berry
@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098

Re: [R] elementary statistics with R (rkward?)

2007-07-11 Thread Charles Annis, P.E.
bookseller, including the nearest university bookstore. Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Donatas G. Sent: Wednesday, July 11, 2007 9

Re: [R] Split graphs

2007-07-09 Thread Charles Annis, P.E.
Jessie: How many pixels would you need to allocate for each of these 1000 parts? Is that feasible? Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED

[R] connecting to process?

2007-06-23 Thread Charles Cosse
Hello, sorry if this is a duplicate message -- the R mail-server told me that my original post was being held for moderator approval. Whatever. I just want to know if it is possible to connect R to a running process and have realtime data updates to some plots? Thanks, Charles

[R] Fwd: connecting to process?

2007-06-23 Thread Charles Cosse
-- Forwarded message -- From: Charles Cosse [EMAIL PROTECTED] Date: Jun 23, 2007 12:33 PM Subject: Re: [R] connecting to process? To: Prof Brian Ripley [EMAIL PROTECTED] Thank you. Just trying to decide if now is a good time for me to make the effort to learn some R. I've just

Re: [R] Highliting a text in a plot

2007-06-23 Thread Charles Annis, P.E.
for legend (?legend) and modify it, or use parts of it for your own function. Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Maja Schröter

[R] connecting to running process possible?

2007-06-22 Thread Charles Cosse
you, Charles Cosse [[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented

Re: [R] Inverse BoxCox transformation

2007-06-18 Thread Charles Annis, P.E.
Look at the definition for the transform. For example in the car package, ?box.cox Then do the simple algebraic manipulations yourself. Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original Message- From: [EMAIL

Re: [R] Efficiently calculate sd on an array?

2007-06-17 Thread Charles C. Berry
, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://famprevmed.ucsd.edu/faculty/cberry/ La Jolla, San Diego 92093-0901

Re: [R] R programming question

2007-06-14 Thread Charles C. Berry
http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC

Re: [R] Normal and Poisson tail area expectations in R

2007-06-14 Thread Charles C. Berry
-Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of kavindra malik Sent: Wednesday, June 13, 2007 5:45 PM To: Charles C. Berry Cc: r-help@stat.math.ethz.ch Subject

Re: [R] Retain names in conversion of matrix to vector

2007-06-14 Thread Charles C. Berry
-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http

Re: [R] passing (or obtaining) index or element name of list to FUN in lapply()

2007-06-13 Thread Charles C. Berry
1865 272595 __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles

Re: [R] Normal and Poisson tail area expectations in R

2007-06-13 Thread Charles C. Berry
guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED

Re: [R] How to specify the start position using plot

2007-06-10 Thread Charles Annis, P.E.
plot( x=rnorm(25, 0.5, 0.3), y=rnorm(25, 4, 1), xlim=c(0,1), ylim=c(2,7)) # ^^ for example Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original

Re: [R] How to load a big txt file

2007-06-06 Thread Charles C. Berry
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED

Re: [R] How to load a big txt file

2007-06-06 Thread Charles C. Berry
On Wed, 6 Jun 2007, Charles C. Berry wrote: Alex, See R Data Import/Export Version 2.5.0 (2007-04-23) search for 'large' or 'scan'. Usually, taking care with the arguments nlines, what, quote, comment.char should be enough to get scan() to cooperate. You will need

Re: [R] Question about parse and expression

2007-06-06 Thread Charles C. Berry
__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098

Re: [R] GUI for R running under Linux

2007-06-04 Thread Charles C. Berry
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC

Re: [R] Harrell's C

2007-06-02 Thread Charles C. Berry
://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family

Re: [R] Updating R version

2007-06-02 Thread Charles C. Berry
/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive

Re: [R] Excel calling R functions

2007-06-01 Thread Charles Annis, P.E.
You might consider having R do everything: R can read the Excel sheet, do what needs to be done, and write the results to an Excel sheet. Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original Message- From

Re: [R] Conditional logistic regression for events/trials format

2007-06-01 Thread Charles C. Berry
On Thu, 31 May 2007, Strickland, Matthew (CDC/CCHP/NCBDDD) (CTR) wrote: Thanks for your reply Charles. I do indeed have other variables. I apologize for being vague, here is my study in more detail: I have a cohort of births. My outcome is a dichotomous variable for presence/absence

Re: [R] Conditional logistic regression for events/trials format

2007-05-31 Thread Charles C. Berry
-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098

Re: [R] R keeps crashing when executing 'rlogspline'

2007-05-31 Thread Charles C. Berry
-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://biostat.ucsd.edu

Re: [R] Generating Data using Formulas

2007-05-30 Thread Charles C. Berry
not sure how to do that. Please help and thank you for your time, christian falde [snip] Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://biostat.ucsd.edu

Re: [R] Partially reading a file (particularly)

2007-05-29 Thread Charles C. Berry
-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://biostat.ucsd.edu/~cberry

Re: [R] graphics edge in win.metafile?

2007-05-26 Thread Charles Annis, P.E.
. Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of LL Sent: Saturday, May 26, 2007 1:14 PM To: LL; r-help@stat.math.ethz.ch Subject: [R

Re: [R] In which package is the errbar command located?

2007-05-25 Thread Charles C. Berry
@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098

Re: [R] reading a big file

2007-05-24 Thread Charles C. Berry
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC

Re: [R] Selecting complementary colours

2007-05-21 Thread Charles C. Berry
@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098

Re: [R] Why a multi column, tab delimited file has only one column after reading in with read.table specification sep=\t

2007-05-20 Thread Charles C. Berry
-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://biostat.ucsd.edu/~cberry

Re: [R] Truncating trailing digits

2007-05-03 Thread Charles Annis, P.E.
Perhaps format is what you are looking for: ?format Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Pietrzykowski, Matthew (GE

Re: [R] RWinEdt and Windows Vista

2007-04-28 Thread Charles Annis, P.E.
on the icon, as usual.) To do that, right-click on the program's icon and choose Run as administrator. Perhaps this will solve your RWinEdt problems as well. Best wishes! Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original

Re: [R] Randomising matrices

2007-04-28 Thread Charles C. Berry
## -- ## Arguments: x - number to sample, marg - a vector of integers ## -- ## Author: Charles C. Berry, Date: 28 Apr 2007, 08:17 ## GPL 2.0 or better if (!(x=sum(marg) all(marg=0))) browser() wm - which(marg!=0) if (length(wm

[R] Retraction WAS: Re: Randomising matrices

2007-04-28 Thread Charles C. Berry
Sorry folks, With some further checking, it turns out that this sampling scheme does not conform to the relevant null. :-( Chuck On Sat, 28 Apr 2007, Charles C. Berry wrote: Nick Cutler s0455078 at sms.ed.ac.uk writes: I would like to be able to randomise presence-absence (i.e. binary

[R] [R-pkgs] Hmisc Version 3.3-2 is now in CRAN repository

2007-04-27 Thread Charles Dupont
' to indicate that the row or col names should be wrapped in the latex math environment. Fixed problem with 'histbackback' function. -- Charles Dupont Computer System Analyst School of Medicine Department of Biostatistics Vanderbilt University

Re: [R] intersect more than two sets

2007-04-24 Thread Charles C. Berry
-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http

Re: [R] Dominance in qtl model

2007-04-23 Thread Charles C. Berry
__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534

Re: [R] names( d$columnname )

2007-04-22 Thread Charles C. Berry
http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego

Re: [R] how to convert the lower triangle of a matrix to a symmetric matrix

2007-04-19 Thread Charles C. Berry
@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098

Re: [R] Matrix or grid conversion of spatial data

2007-04-18 Thread Charles C. Berry
guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San

Re: [R] Extracting approximate Wald test (Chisq) from coxph(..frailty)

2007-04-17 Thread Charles C. Berry
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED

Re: [R] Question of the impact of the pilot experiment on the overal statistic interpretation of the subsequent work

2007-04-17 Thread Charles C. Berry
@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098

Re: [R] Greek symbols in xtable rows

2007-04-16 Thread Charles C. Berry
. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://biostat.ucsd.edu/~cberry/ La Jolla, San Diego 92093-0901

Re: [R] Reasons to Use R (no memory limitations :-))

2007-04-15 Thread charles loboz
This thread discussed R memory limitations, compared handling with S and SAS. Since I routinely use R to process multi-gigababyte sets on computers with sometimes 256mb of memory - here are some comments on that. Most memory limitations vanish if R is used with any relational database. [My

Re: [R] sas.get problem

2007-04-11 Thread Charles Dupont
, wait = TRUE, intern = output) also line sasprog = 'C:Program Files/SAS/SAS9.1/sas.exe should be sasprog = 'C:/Program Files/SAS/SAS9.1/sas.exe -- Charles Dupont Computer System Analyst School of Medicine Department of Biostatistics Vanderbilt University

Re: [R] Looping through series of names

2007-04-11 Thread Charles C. Berry
for the functions mentioned there do not answer your question, it would probably help elicit a useful response to spell out how your problem differs from those addressed therein. [rest deleted] Charles C. Berry(858) 534-2098 Dept

Re: [R] Finding a single unique item in duplicated vectors

2007-04-04 Thread Charles C. Berry
__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry

Re: [R] Model comparison

2007-03-30 Thread Charles C. Berry
is on 'non-nested' models. Here is a start: Bradley Efron Comparing non-nested linear models J. of the Amer. Stat'l. Assn. 79:791-803,1984 Google is your friend. Try 'non-nested test' and 'non-nested model' and you will get many hits. [snip] Charles C. Berry(858) 534-2098

Re: [R] Vector indexing question

2007-03-29 Thread Charles C. Berry
) __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry

Re: [R] personalize regression printing?

2007-03-22 Thread Charles C. Berry
the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC

[R] [e1071] predict.svm bug ?

2007-03-15 Thread Charles Hebert
the difference ? Best regards, charles -- Charles Hébert DYnamique et Organisation des GENomes, Laboratoire de Génétique Moléculaire, CNRS UMR 8541 Ecole Normale Supérieure 46, rue d'Ulm 75005 Paris, France [[alternative HTML version deleted]] __ R-help

[R] ols Error : missing value where TRUE/FALSE needed

2007-03-14 Thread Charles Evans
have tried several other combinations of arguments that take TRUE/ FALSE values, but no luck. Ultimately, I am trying to calculate robust standard errors. Any help would be appreciated. Charles Evans Executive Director Free Curricula Center [[alternative HTML version deleted

Re: [R] Another newbie book recommandation question

2007-03-01 Thread Charles Annis, P.E.
Methods, Springer, 1999 15. Venables and Ripley, Modern Applied Statistics with S, 4th ed., Springer, 2002 Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original Message- From: [EMAIL PROTECTED] [mailto

Re: [R] Random Integers

2007-02-25 Thread Charles Annis, P.E.
Sure. rpois(n, lambda) ... will do it. But you should tell us something about how you want your numbers to be distributed, since rpois() produces integers having a Poisson distribution. Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http

Re: [R] Updating or installing R packages on Windows Vista

2007-02-22 Thread Charles Annis, P.E.
Or you can right-click on the R icon and choose Run as administrator. That way you won't alter the security settings and forget to re-set them. After the packages are installed R will load in the usual way by clicking on the icon. Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax

Re: [R] Sorting rows of a binary matrix

2007-02-22 Thread Charles C. Berry
and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://biostat.ucsd.edu/~cberry/ La Jolla

Re: [R] Crosstabbing multiple response data

2007-02-22 Thread Charles C. Berry
read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED

Re: [R] memory management uestion [Broadcast]

2007-02-20 Thread Charles C. Berry
On Tue, 20 Feb 2007, Federico Calboli wrote: Liaw, Andy wrote: I don't see why making copies of the columns you need inside the loop is better memory management. If the data are in a matrix, accessing elements is quite fast. If you're worrying about speed of that, do what Charles

Re: [R] memory management uestion

2007-02-19 Thread Charles C. Berry
, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://biostat.ucsd.edu/~cberry/ La Jolla, San Diego 92093-0901

Re: [R] Migrating .RData from Windows to Linux?

2007-02-16 Thread Charles C. Berry
-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http

Re: [R] R book advice

2007-02-15 Thread Charles Annis, P.E.
for implementing the statistical thinking you've acquired. Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Paul Lynch Sent: Thursday, February 15, 2007

Re: [R] processing a large matrix

2007-02-12 Thread Charles C. Berry
, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://biostat.ucsd.edu/~cberry/ La Jolla, San Diego 92093-0901

Re: [R] installing packages and windows vista

2007-02-07 Thread Charles Annis, P.E.
Thank you Dan! I dunno if I would have ever found that. Thanks! Charles Annis, P.E. [EMAIL PROTECTED] phone: 561-352-9699 eFax: 614-455-3265 http://www.StatisticalEngineering.com -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of [EMAIL PROTECTED

Re: [R] abbreviate dataframe for Sweave output

2007-02-06 Thread Charles C. Berry
, reproducible code. Charles C. Berry(858) 534-2098 Dept of Family/Preventive Medicine E mailto:[EMAIL PROTECTED] UC San Diego http://biostat.ucsd.edu/~cberry/ La Jolla, San Diego 92093-0901

Re: [R] Another loop - deloop question

2007-02-02 Thread Charles C. Berry
list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Charles C. Berry(858) 534-2098 Dept

[R] [R-pkgs] Hmisc Version 3.1-2 uploaded to CRAN repository

2007-01-29 Thread Charles Dupont
zeros. Added arguments 'math.row.names' and 'math.col.names' to indicate that the row or col names should be wrapped in the latex math environment. Fixed problem with 'histbackback' function. -- Charles Dupont Computer System Analyst School of Medicine

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