Re: [R] sin(pi)?

__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer

Re: [R] Interpreting the eigen value of a population matrix (2nd try)

a Bayesian posterior density for lambda using the Bayesian melding methods developed by Adrian Raftery et al., and calculate an HPD interval from that. I've done that too. It's slightly more difficult, however. Simon. Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician

Re: [R] Interpreting the eigen value of a population matrix (2nd try)

for this and I would very appeciate any help! Thank for your time again, Anouk rom: Simon Blomberg s.blomberg1 at uq.edu.au Subject: Re: Interpreting the eigen value of a population matrix (2nd try) Newsgroups: gmane.comp.lang.r.general Date: 2007-08-29 13:10:59 GMT (3 hours

Re: [R] Sphericity test in R for repeated measures ANOVA

PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical Sciences The University

Re: [R] LSD, HSD,...

@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant

Re: [R] type III ANOVA for a nested linear model

sort of editor would overlook this clear and demonstrable message leaping out from the data in favour of some arcane argument about types of sums of squares? Several answers come to mind: A power freak, a SAS afficianado, an idiot. -- Simon Blomberg, BSc (Hons), PhD, MAppStat

Re: [R] EM algorithm for Missing Data.

]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer

Re: [R] Fees to use R

Of course, if your company would like to donate some money to the R foundation, I'm sure it would be greatly appreciated. http://www.r-project.org/foundation/donations.html Cheers, Simon. Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological

Re: [R] ?replace characters within vector data

://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical

Re: [R] Parsimony Analysis of Encemism in R?

]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons

Re: [R] Extracting sums for individual factors in data frames

]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat

Re: [R] why this doesn't work for qqnorm

://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical Sciences The University of Queensland St. Lucia Queensland 4072

Re: [R] unequal variance assumption for lme (mixed effect model)

://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical

Re: [R] ANOVA non-sphericity test and corrections (eg, Greenhouse-Geisser)

On Mon, 2007-06-25 at 17:53 +1000, Simon Blomberg wrote: If you use lme, you can fit a general correlation structure to the within-subject data, and compare the fit to a model assuming uncorrelated within-subjects errors. That should tell you whether your data are ... correlated... (damn

Re: [R] ANOVA non-sphericity test and corrections (eg, Greenhouse-Geisser)

the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical Sciences The University of Queensland St

Re: [R] R vs. Splus in Pharma/Devices Industry

Furthermore, one day we will all be doing our statistics in C. So higher level programming is predicted to become more difficult! Cheers, Simon. Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical Sciences The University

Re: [R] if statement

, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical Sciences The University of Queensland St. Lucia Queensland 4072 Australia Room 320, Goddard Building (8) T: +61 7 3365 2506 email

Re: [R] PCA for Binary data

. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer

Re: [R] Expand duplicated observations

/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical Sciences The University

Re: [R] Expand duplicated observations

code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical Sciences The University of Queensland St. Lucia Queensland 4072 Australia Room 320, Goddard Building (8) T: +61 7 3365 2506 email: S.Blomberg1_at_uq.edu.au

Re: [R] fixed effects anova in lme lmer

, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical Sciences The University of Queensland St. Lucia Queensland 4072 Australia Room 320, Goddard Building (8) T: +61 7 3365 2506 email

Re: [R] ANOVA results in R conflicting with results in other software packages

contrast codings. That would be tempting the wrath of the gods. See section 7.18 in the R FAQ. John Fox's Companion book also has a brief discussion (p. 140). Cheers, Simon. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical

Re: [R] Reduced Error Logistic Regression, and R?

://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, BSc (Hons), PhD, MAppStat. Lecturer and Consultant Statistician Faculty of Biological and Chemical

Re: [R] Suggestions for statistical computing course

are terrified of anything that doesn't look like a Microsoft OS. The only caveat is the disk space utilization. Having a complete OS image for every student for every class could eat up terabytes of space. But heck, terabyte RAID arrays are readily available these days. Fred -- Simon

Re: [R] novice/beginner's reading list for non-programmers learning R?

the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2

Re: [R] Using boot.ci to find lower confident bound

/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email

Re: [R] Help on variable ranking

-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre

Re: [R] SNA Matrix

the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200

Re: [R] Geometric Brownian Process

the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200

Re: [R] How to sum one column in a data frame keyed on other columns

? __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat

Re: [R] lmer, p-values and all that

guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200

Re: [R] Adding terms to a function

__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D

Re: [R] Nested for loop

-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800

Re: [R] Chi-Square Goodness-of-Fit test

/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia

Re: [R] lmer and a response that is a proportion

.) __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D

Re: [R] comments in scan

PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University

Re: [R] comments in scan

@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource

Re: [R] ANOVA in Randomized-complete blocks design

-- __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons

Re: [R] ANOVA in Randomized-complete blocks design

code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email

Re: [R] New package Ryacas

ideas where I may be going wrong? I don't know anything about sockets. I've cross-posted to r-sig-debian. They may be interested. Cheers, Simon. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University

Re: [R] remotely saving an R session

, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email

Re: [R] Extracting overdispersion estimates from lmer amd glm objects

]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg

[R] R in Nature

references to R Development Core Team, and I received no hits. So I tentatively conclude that our paper is the first Nature paper to cite R. A great many thanks to the R Development Core Team for R, and Prof. Bates for lmer. Cheers, Simon. (I'm off to the pub to celebrate.) -- Simon Blomberg

Re: [R] R in Nature

a handful of these in Nature from around 2003. Chuck On Fri, 25 Aug 2006, Simon Blomberg wrote: Hi all, We've just had a paper accepted for publication in Nature. We used R for 95% of our analyses (one of my co-authors sneaked in some GenStat when I wasn't looking.). The preprint is available from

Re: [R] merge 2 data frame based on more than 2 variables

)) assuming both data frames have columns VarA and VarB. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email: Simon.Blomberg_at_anu.edu.au F: +61 2 6125 0757 CRICOS

Re: [R] merge 2 data frame based on more than 2 variables

Then instead of by, use by.x and by.y to specifiy the variable names separately for both data frames. See ?merge, especially the examples. Wensui Liu wrote: what if the names are different in 2 data frames? On 8/14/06, Simon Blomberg [EMAIL PROTECTED] wrote: Wensui Liu wrote

Re: [R] basic question re lm()

guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125

Re: [R] Data transformation

the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2

Re: [R] Help with matrix manipulation

-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email: Simon.Blomberg_at_anu.edu.au F: +61 2 6125 0757 CRICOS Provider # 00120C

Re: [R] How to obtain 95th percentile of a normal distribution of a continuous variable

/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University

Re: [R] planned comparisons for ANOVA

-- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email: Simon.Blomberg_at_anu.edu.au F: +61 2 6125 0757 CRICOS Provider # 00120C

Re: [R] Scalling/Centering the Data by an Index

[[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D

[R] Suggestion for ?split

that the help page for split be amended to include this feature. I know it's a small thing, but someone else may also find it useful to know. Cheers, Simon. -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT

Re: [R] Decimal series how to make.........

] [[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D

Re: [R] Zero-inflated Poisson Repeated Measures Data

: (03) 5833 5397 Email: [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D

Re: [R] Help In Function

://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email

Re: [R] ape comparative analysis query

Chris Knight wrote: This raises various questions: 1) Was I misleading myself that my independent contrasts were valid in the first place? I think partly. Independent contrasts were designed for data for tip taxa only, not ancestral state data. One of the steps in the algorithm requires

Re: [R] How to find row maximum of two columns

__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National

Re: [R] predict.glmmPQL Problem

do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email: Simon.Blomberg_at_anu.edu.au F

Re: [R] write.table command

* * [[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat

Re: [R] How do I tell it which directory to use?

__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource

Re: [R] stripchart-y axis labels

-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email

Re: [R] How to sum values across multiple variables using a wildcard?

__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian

Re: [R] Help! What does this R command mean?

]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental

Re: [R] Help! What does this R command mean?

mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200

Re: [R] Extracting variance components in lme

v - VarCorr(fm1Rail.lme) str(v) # get an idea of how v is structured. This suggests: as.numeric(v[1, 2]) [1] 24.80547 There may be easier and better ways HTH, Simon. At 11:02 AM 3/11/2005, you wrote: Consider the output for the inroductory Rail example in Mixed Effects Models in S and

Re: [R] R- exp(-1000) ? - how to get R to give me an actual answer ?

At 03:42 PM 26/10/2005, you wrote: We can double check this with yacas which is a free computer algebra system that supports arbitrary precision math: In N(Exp(-1000)) Out 0.5075958898e-434 Or in Axiom, which is open source too: numeric exp(-1000) 0.50759588975494567653E-434 Type:

Re: [R] Population Projections

__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental

Re: [R] Extracting Variance Components

[[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre

Re: [R] a silly question on index of a matrix

mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61

Re: [R] newbie questions - looping through hierarchial datafille

Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email: Simon.Blomberg_at_anu.edu.au F: +61 2 6125 0757 CRICOS Provider # 00120C

Re: [R] Translating lme model call to lme4

]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National

Re: [R] how to do multiple comparisons in R?

R has various methods for multiple comparison procedures. See package multcomp, or ?TukeyHSD or ?pairwise.t.test for example. An RSiteSearch(multiple comparison) returned 187 results. A priori contrasts can be constructed using the make.contrasts function in the gmodels package, for example.

Re: [R] barplots - text direction

https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800

Re: [R] extract t-values from pairwise.t.test

I think the questioner was interested in pairwise.t.test. See ?pairwise.t.test. From looking at the source, pairwise.t.test calls t.test if sd's are not pooled, or calculates its own t.val if sds are pooled. It looks very easy to hack to return the t values instead of the p values. Simon. At

Re: [R] how to test this

the posting guide! http://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email: Simon.Blomberg_at_anu.edu.au F: +61 2 6125 0757 CRICOS

Re: [R] Anova's in R

://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email: Simon.Blomberg_at_anu.edu.au F: +61 2 6125 0757 CRICOS Provider # 00120C

Re: [R] Error in FUN(newX[, i], ...) : `x' must be atomic

Aah, OK. Thanks for the correction. I learn something new every day. That's why I like this list! Serves me right for relying on my Lisp knowledge. Cheers, Simon. At 07:26 PM 27/07/2005, Peter Dalgaard wrote: Simon Blomberg [EMAIL PROTECTED] writes: Actually, atoms are originally a Lisp

Re: [R] Error in FUN(newX[, i], ...) : `x' must be atomic

/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email

Re: [R] Nested ANOVA with a random nested factor (how to use the lme function?)

mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2

Re: [R] help: how to get the position of a value in a matrix

See ?which Hint: arr.ind=TRUE Simon. At 09:28 AM 14/07/2005, wu sz wrote: Hello, I have a data set matrix of 1200 * 15. How can I get the position of a specific value in the matrix? I use seq(along = x)[x value] to look for the position of the value in the matrix, but seq can just find the

Re: [R] crossed random fx nlme lme4

read Pinheiro Bates, the jan 05 newsletter, and several postings. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc

Re: [R] CIs in predict?

At 08:40 AM 12/07/2005, Guy Forrester wrote: Dear All, I am trying to put some Confidence intervals on some regressions from a linear model with no luck. I can extract the fitted values using 'predict', but am having difficulty in getting at the confidence intervals, or the standard errors.

Re: [R] Finding out collinearity in regression

://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email

Re: [R] sample R code for multiple imputation

with EM, MCMC, etc Any help / suggestion will be greatly appreciated. David Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Centre for Resource and Environmental Studies The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 7800 email: Simon.Blomberg_at_anu.edu.au

Re: [R] quotient and remainder

! http://www.R-project.org/posting-guide.html __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html Simon Blomberg, B.Sc.(Hons.), Ph.D

Re: [R] logistic regression

-- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting Fellow School of Botany Zoology The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 8057 email: [EMAIL PROTECTED] F: +61 2 6125 5573 CRICOS Provider # 00120C __ R

Re: [R] turning labels into a vector

@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting Fellow School of Botany Zoology The Australian National University Canberra ACT 0200 Australia T

Re: [R] turning labels into a vector

__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting Fellow School of Botany Zoology The Australian National University Canberra

Re: [R] Double hurdle model in R

mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting Fellow School of Botany Zoology The Australian National University Canberra ACT 0200 Australia T: +61 2

Re: [R] Iterative process for reading in text files

guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting Fellow School of Botany Zoology The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 8057 email: [EMAIL PROTECTED] F: +61 2 6125 5573 CRICOS Provider # 00120C

Re: [R] extracting correlations from nlme

deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting Fellow School of Botany

Re: [R] R package that has (much) the same capabilities as SAS v9 PROC GENMOD

Children Hospital Medical Center __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting

Re: [R] LME correlation structures: user defined

read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting Fellow School of Botany Zoology The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 8057 email: [EMAIL PROTECTED] F: +61 2 6125 5573 CRICOS

Re: [R] (no subject)

-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting Fellow School of Botany Zoology The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 8057 email: [EMAIL PROTECTED] F: +61 2 6125 5573 CRICOS Provider # 00120C

Re: [R] Anova with Scheffe Tests

you can provide. Sam __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting Fellow

RE: [R] Anova with Scheffe Tests

, CA The business of the statistician is to catalyze the scientific learning process. - George E. P. Box -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Simon Blomberg Sent: Tuesday, March 01, 2005 4:25 PM To: [EMAIL PROTECTED]; R-help

Re: [R] an R script editor for Mac

-- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting Fellow School of Botany Zoology The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 8057 email: [EMAIL PROTECTED] F: +61 2 6125 5573 CRICOS Provider # 00120C __ R-help

Re: [R] Calculate Mean of Column Vectors?

-guide.html -- Simon Blomberg, B.Sc.(Hons.), Ph.D, M.App.Stat. Visiting Fellow School of Botany Zoology The Australian National University Canberra ACT 0200 Australia T: +61 2 6125 8057 email: [EMAIL PROTECTED] F: +61 2 6125 5573 CRICOS Provider # 00120C [[alternative HTML version deleted

RE: [R] summary.manova and rank deficiency

Sorry for reposting. I didn't receive any of the replies to my original message (must be an email problem at my end). I will read the responses in the archive. Thanks! Simon. Simon Blomberg, PhD Depression Anxiety Consumer Research Unit Centre for Mental Health Research Australian National

  1   2   >