Re: [R-sig-phylo] time axis in fan style phylogeny: arcs did not appear in eps file

2023-06-24 Thread Felipe Rossetto
Hey Liam, Thank you so much for your reply. Yes, the arcs appear when I save it in pdf, which supports an image in a good resolution. I just changed the *make.transparent* but the arcs did not appear in the plot. Thanks a lot again! All the best Felipe Em dom., 25 de jun. de 2023 às 01:37,

Re: [R-sig-phylo] time axis in fan style phylogeny: arcs did not appear in eps file

2023-06-24 Thread Liam J. Revell
Dear Felipe. It's possible that .eps doesn't support transparency. Have you tried plotting to a different device, e.g., .pdf or .png? Alternatively, you could undo the transparency by changing /make.transparent("blue",0.1)/ for just /"blue"/. All the best, Liam Liam J. Revell Professor of

[R-sig-phylo] time axis in fan style phylogeny: arcs did not appear in eps file

2023-06-24 Thread Felipe Rossetto
Dear all, I am including time axis in a circular phylogeny following this nice post http://blog.phytools.org/2018/02/another-technique-for-including-time.html where this loop is used to drawing arcs: for(i in 1:length(obj)){ a1<-0 a2<-2*pi draw.arc(0,0,radius=obj[i],a1,a2,lwd =1,