Re: [R-sig-phylo] combining p-values in PCMs

2013-04-02 Thread Liam J. Revell
Hi Vladimir. I'm not clear on the source of your misunderstanding, so let me do my best. 1) I think that's right is casual shorthand in English. In this case I just mean that I think that this method will give us the correct variance on beta (but I'm not sure - hence 'I think'). It certainly

Re: [R-sig-phylo] combining p-values in PCMs

2013-04-02 Thread Mark Holder
On Mon, Apr 1, 2013 at 10:10 AM, Joe Felsenstein j...@gs.washington.edu wrote: John D asked: [snip] Imagine that I run a PIC analysis on two traits using 1000 post-burn-in trees. What would be the best way to summarize these results? Average p-values across all analyses? Joe's response