Re: [R-sig-phylo] coordinates for phylo tips

-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/ -- Gwennaël BATAILLE, PhD student - Teaching assistant Earth and Life Institute Université Catholique de Louvain SST/ELI/ELIB Bâtiment Carnoy, c.145

[R-sig-phylo] Force a topology - Cophyloplot {ape}

, but do not know how... (PS : I am using phylograms). Thank you very much for any help ! Gwennaël -- Gwennaël BATAILLE, PhD student - Teaching assistant Earth and Life Institute Université Catholique de Louvain SST/ELI/ELIB Bâtiment Carnoy, c.145 Croix du sud 4-5, bte L7.07.04 1348 Louvain-la

[R-sig-phylo] Plot size

Dear R-sig-phylo users, I would like to rescale a large tree, but I am not an expert of graphs in R... My labels overlap with each other. And I would like to find an option to put more space between each branch, but could not find one. So I tried to resize the labels (playing with cex

[R-sig-phylo] Mapping Trait Value+ Combining DNA/Trait + Coevolution

coevolution ; do something similar exist in R to test for specific hypotheses (i.e. association by descent, host switching, and so on) ? Thanks a lot in advance. Best regards, Gwennaël Bataille - gwennael.batai...@uclouvain.be mailto:gwennael.batai...@uclouvain.be -- Gwennaël BATAILLE, PhD

[R-sig-phylo] Boostrap and likelihood values on branches

, as.phyDat(alnx2)) alnx2parsoptim - optim.parsimony(rtrx, as.phyDat(alnx2)) plot(alnx2parsoptim) Thanks a lot in advance for your answer. All the best, Gwennaël Bataille ___ Salmo

[R-sig-phylo] Error message using clustal{ape} under Windows

= \\ But always get the same error message… Thank you very much in advance for your help. Regards, Gwennaël Bataille ___ R-sig-phylo mailing list R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo