Re: [R-sig-phylo] command for access posterior probabilities values of pie charts obtained from make.simmap

2023-08-22 Thread Felipe Rossetto
Thank you so much, Liam! Em ter., 22 de ago. de 2023 às 12:27, Liam J. Revell escreveu: > Dear Felipe. > > Assuming your "multiSimmap" object is called *maps*, you can try > something like *summary(maps)$ace*. That should be a matrix with the > posterior probabilities from stochastic mapping

Re: [R-sig-phylo] command for access posterior probabilities values of pie charts obtained from make.simmap

2023-08-22 Thread Liam J. Revell
Dear Felipe. Assuming your "multiSimmap" object is called /maps/, you can try something like /summary(maps)$ace/. That should be a matrix with the posterior probabilities from stochastic mapping at all the nodes and tips of the tree. All the best, Liam Liam J. Revell Professor of Biology,

[R-sig-phylo] command for access posterior probabilities values of pie charts obtained from make.simmap

2023-08-22 Thread Felipe Rossetto
Dear all, I am trying to find an email where Liam showed a command that allows us to get the posterior probability values of pie charts at nodes of trees resulting from make.simmap computation, but I failed to find it. Does someone know this command? If yes, I am very grateful, if it is possible