Hi Timothee,
Assuming that I figured out your tree format correctly, I have written
you a function to translate your tree-as-data-frame into an object of
class phylo in R. I attach the disclaimer that this is programmed
very inelegantly and may contain errors. It also contains no method for
Dear users,
I am currently doing a model of community assembly, and I would like to
integrate phylogenetic information. For each organism, I know its ancestor
and the time at which speciation occured. These informations are stored in
a data.frame, an example of which is here :
PhyloTree