Re: [R-sig-phylo] Rooting trees in R

Thanks. De :Juan Antonio Balbuena <j.a.balbu...@uv.es> A : valentine.uso...@inspq.qc.ca Cc :"r-sig-phylo@r-project.org" <r-sig-phylo@r-project.org> Date : 2017-05-24 04:51 Objet : Re: [R-sig-phylo] Rooting trees in R As a general reference text to h

Re: [R-sig-phylo] Rooting trees in R

As a general reference text to handle phylogentic data and sequences in R, you may have a look at Paradis (2011) Analysis of Phylogenetics and Evolution in R, 2nd edition. Springer. Best wishes Juan A. Balbuena --

Re: [R-sig-phylo] Rooting trees in R

see root() in the R package ape or reroot() in phytools J > On May 23, 2017, at 1:22 PM, Valentine Usongo > wrote: > > Dear members > > My name is Valentine Usongo and I am a postdoctoral trainee at the INSPQ > Montreal-Quebec. I am working on the use of whole

[R-sig-phylo] Rooting trees in R

Dear members My name is Valentine Usongo and I am a postdoctoral trainee at the INSPQ Montreal-Quebec. I am working on the use of whole genome sequenced based methods for the detection of foodborne outbreaks in Salmonella. I am still a neophyte in the field of bioinformatics. I just