Re: [Wien] LDA-U error for SrVO3 during orb

2015-06-05 Thread Gavin Abo
No, those are errors that you should address. The vec2old_lapw error should be resolved first, because it might be causing the unmatched error. Usually, the vec2old_lapw: Command not found occurs because tcsh is not installed. Though, it could also happen if the Linux environment cannot

Re: [Wien] Wien2k OPTIC crashing for XMCD calculation

2015-06-05 Thread Gavin Abo
It looks like it is reading the XMCD line in case.inop just fine, because I see XMCD selected for atom 1 L23 in the output below for x optic. As it says in section 8.17 OPTIC (calculating optical properties) of the WIEN2k 14.2 usersguide on page 164, the matrix elements for XMCD are

Re: [Wien] LDA-U error for SrVO3 during orb

2015-06-05 Thread Gavin Abo
6, 2015 at 12:20 AM, Gavin Abo gs...@crimson.ua.edu mailto:gs...@crimson.ua.edu wrote: It is difficult to tell where the error is coming from. Can you try running the scf with the verbose switch (-v)? For example, in a terminal, try running one cycle: csh -v $WIENROOT/run_lapw

Re: [Wien] Unusually long cpu time in lapw1

2015-06-09 Thread Gavin Abo
WIEN2k-FAQ: How to set a good RKmax value? http://www.wien2k.at/reg_user/faq/rkmax.html On 6/9/2015 8:23 AM, Pascal Boulet wrote: Hello, Why do you set rkmax to such a small value (3)? My little experience tells me that the larger rkmax the better the accuracy of the calculation. The

Re: [Wien] esepar0 and eseparmin

2015-06-22 Thread Gavin Abo
The statement is not correct. See section 7.7.3 Input of the WIEN2k 14.2 usersguide (page 124) [ http://www.wien2k.at/reg_user/textbooks/usersguide.pdf ], where it says that EF-esepermin is the start energy for the search and eseper0 is the minimum gap width. It is known that there are

Re: [Wien] Optimal lattice constants in orthorombic structure ?

2015-06-24 Thread Gavin Abo
You can use the script parabolfit_lapw [ https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg11268.html ]. Refer to the WIEN2k 14.2 usersguide (section 5.10.3 parabolfit_lapw) [ http://www.wien2k.at/reg_user/textbooks/usersguide.pdf ]. On 6/24/2015 1:42 AM, Marzieh Gh wrote:

Re: [Wien] Assignment of session ID for w2web

2015-06-27 Thread Gavin Abo
For example, if you have an existing folder containing calculation files called TiC, enter TiC in the Create new session box in w2web and click the Create button. Then, you can select the existing TiC folder in w2web, which should reassign it a session ID. However, it is a good idea to first

Re: [Wien] esepar0 and eseparmin

2015-06-23 Thread Gavin Abo
See slide 16 in the file at http://www.wien2k.at/events/ws2008/talks/Blaha.pdf . In the figure, it can be seen that small gaps are skipped in the search when the value of E-separ0 (esepar0) is set slightly larger than small gaps, such that E-separ (Energy to separate low and high

Re: [Wien] Total energy of molecular H2

2015-06-15 Thread Gavin Abo
Below are reference links on H2 molecule calculations using WIEN2k: http://zeus.theochem.tuwien.ac.at/pipermail/wien/2003-October/000880.html https://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg01274.html https://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg08114.html

Re: [Wien] error in GGA+U calculation for 2D structure

2015-06-16 Thread Gavin Abo
It looks like natorb in the inorb file should be 6, but it is 2. On 6/16/2015 10:24 PM, vishal jain wrote: Dear All, i found error during GGA+U Calculation for 2D structure of Co2CrAl/GaAs.Struct, orb and indmc files attached here. What is the needed procedure for GGA +U calculation for 2D

Re: [Wien] New installation

2015-06-12 Thread Gavin Abo
Did you add a source line for compilervars.sh to the .bashrc startup file [ https://software.intel.com/en-us/node/510157 ]? $ grep compilervars.sh ~/.bashrc source /opt/intel/bin/compilervars.sh intel64 = If the compilervars.sh line has been added, a line similar to this should be returned.

Re: [Wien] lapw2dm error in LDA+U calculation with spin-orbit coupling.

2015-06-16 Thread Gavin Abo
Dear Prof. Blaha, Having just stop error (and Error in LAPW2DM) seems similar to before [ http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg09655.html ]. Perhaps, it would help in a future release to have an additional more distinct error message generated in the standard

Re: [Wien] Error for sphere overlapping

2015-06-02 Thread Gavin Abo
As the error indicates, there is a problem with the contents of the c-mini.in0 file. Without seeing what is in c-mini.in0, it is hard to know what is wrong. The case.in0 format has changed between 13.1 and 14.2. The functionals used to be specified with a number like 13 for PBE, but now

Re: [Wien] How to calculate U for 3d-fully filled

2015-05-28 Thread Gavin Abo
As far as I know, two methods are currently used to calculated U in WIEN2k [ http://www.cms.tuwien.ac.at/media/uploads/cms/psi-presentations/Blaha.ppt (Slide 10) ]: 1) Fitting method: Adjust U until the desired results are obtained (i.e., until the calculated results are matched to the

Re: [Wien] Error for sphere overlapping

2015-05-28 Thread Gavin Abo
Yes, you can try decreasing the RMT, where it is recommended to use setrmt (terminal) or set automatically RMT and continue editing (w2web) [ http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg07996.html , http://www.wien2k.at/reg_user/faq/rmt.html ]. Or you might want to

Re: [Wien] How to use the ElaStic1.0 package to calculate the elastic properties

2015-05-29 Thread Gavin Abo
See the README file in ElaStic_1.0.tar.gz at http://exciting-code.org/elastic . On 5/29/2015 9:23 AM, Abed Reg wrote: Hello all the developpers of wien2k I want to know how to use the package ElaStic 1.0 to calculate the elastic properties within wien2k . As you know there is a tutorial to

Re: [Wien] steps for GGA+U method

2015-05-29 Thread Gavin Abo
1) Select GGA during init_lapw (or later by modifying case.in0) [ http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg07478.html ] As described in section 4.5.6 Orbital potentials on page 47 in the WIEN2k 14.2 usersguide [ http://www.wien2k.at/reg_user/textbooks/usersguide.pdf

Re: [Wien] How to use the ElaStic1.0 package to calculate the elastic properties

2015-05-30 Thread Gavin Abo
The environment variable [ http://en.wikipedia.org/wiki/Environment_variable ] ElaSticROOT needs to contain the location path to where you have ElaStic. The ElaStic program needs to know where it is located on your system, the ElaSticROOT is used to tell the ElaStic program where you put it.

Re: [Wien] LDA-U error for SrVO3 during orb

2015-06-01 Thread Gavin Abo
As described in section 4.5.6 Orbital potentials on page 47 in the WIEN2k 14.2 usersguide [ http://www.wien2k.at/reg_user/textbooks/usersguide.pdf ], non-magnetic LDA+U calculations must be done spin-polarized (runsp_c_lapw -orb). It looks like you ran x orb instead of x orb -up (or x orb

Re: [Wien] charge fluctuation

2015-07-03 Thread Gavin Abo
You can probably figure out how to use clmextrapol_lapw by looking at an optimize.job script: http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg12205.html http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg08291.html

Re: [Wien] Electrical conductivity

2015-06-27 Thread Gavin Abo
How can we find electrical conductivity using boltzTraP while in output file we receive s/ t ? You can read the old post at https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg09913.html There is a small mistake in the post, it should be see Table II of Asen-Palmer et al. PRB

Re: [Wien] charge fluctuation

2015-07-04 Thread Gavin Abo
Perhaps, someone with more experience using clmextrapol_lapw will comment later. It is the weekend and in some places it may be a holiday (Fourth of July weekend in the US). Though, you can probably get the answer to your question through trial and error. If you try the procedure and the

Re: [Wien] Fwd: EFG and MM

2015-07-04 Thread Gavin Abo
Did you read page 10 in efg2.pdf? The EFG information is outputted in case.scf0 and case.output2: /The EFG is calculated in the local coordinate system, and it is printed (in case.scf0 and// //case.output2) in this one as well as in its PAS (principal axis system) with respect to// //the

Re: [Wien] asking

2015-07-04 Thread Gavin Abo
For studying elastic properties, there are several programs that you can choose from. a) ELAST: See section 8.5 ELAST (Elastic constants for cubic cases) on page 141 in the WIEN2k 14.2 usersguide [ http://www.wien2k.at/reg_user/textbooks/usersguide.pdf ] b) IRelast: See section 8.8 IRelast

Re: [Wien] Wien2k installation issues

2015-07-02 Thread Gavin Abo
After you added and saved in .bashrc the line export LC_NUMERIC=en_US did you reload .bashrc in the bash terminal with source ~/.bashrc (or close and open a new bash terminal) If you enter the terminal command: locale Does it return in the output LC_NUMERIC=en_US Instead of export

Re: [Wien] Error in LAPW2DM

2015-07-06 Thread Gavin Abo
Did you apply the source code fix to symmetso's clmchange.f of WIEN2k 14.2 and accept the new structure generated by symmetso during initso [ http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg12523.html ]? There is clmchange.f at:

Re: [Wien] Error in LAPW2DM

2015-07-06 Thread Gavin Abo
Szent-Gyorgi On Jul 6, 2015 19:19, Gavin Abo gs...@crimson.ua.edu mailto:gs...@crimson.ua.edu wrote: Did you apply the source code fix to symmetso's clmchange.f of WIEN2k 14.2 and accept the new structure generated by symmetso during initso [ http://www.mail-archive.com/wien

Re: [Wien] Is EMCD calculation possible using Wien2k ?

2015-05-25 Thread Gavin Abo
EMCD calculations have been done using WIEN2k [1, 2]. [1] http://arxiv.org/abs/0704.1407v1 [2] http://www.chiraltem.physics.at/Workshop2_Rusz.pdf On 5/25/2015 1:53 AM, Santu Baidya wrote: Dear Prof. Blaha and wien2k users, In userguide and in forum it is described that optic program can be

Re: [Wien] The correct choice of mkl libraries to compile wien2k

2015-05-22 Thread Gavin Abo
kgen.def OEF -numk 500 OEF kgen XML parse exception: unknown:1:1: syntax error This show me the problem is in kgen. Any clue? Thanks in advance, Nilton 2015-05-21 19:07 GMT-03:00 Gavin Abo gs...@crimson.ua.edu mailto:gs...@crimson.ua.edu: Regarding the error: atpar_tmp_.F:(.text

Re: [Wien] The correct choice of mkl libraries to compile wien2k

2015-05-21 Thread Gavin Abo
, the Makefile works very well on wien2k_10.1 2015-05-20 20:37 GMT-03:00 Gavin Abo gs...@crimson.ua.edu mailto:gs...@crimson.ua.edu: Sorry, there is a mistake in my previous post. The -Wl,--end-group should go after libmkl_core.a. The corrected settings are given below: current:R_LIBS

Re: [Wien] Help for geometry optimization

2015-05-21 Thread Gavin Abo
After you edited case.inM, did you run x pairhess -copy as it mentions in the post at: http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg07226.html On 5/21/2015 9:19 AM, B Tankhilsaihan wrote: Hello Dear Peter Blaha I am running on WIEN2k_13.01 version The purpose of my

Re: [Wien] Wien2k installation problem

2015-07-07 Thread Gavin Abo
X86_64-K1om-linux-ld = I think this is a linker for Intel Xeon Phi coprocessors. As the error message says, it cannot find the X86_64-K1om-linux-ld file. I guess that you have to install a redhat package (I would expect that redhat support [ https://access.redhat.com/support/ ] would be able

Re: [Wien] Error in spin orbit calculation

2015-08-17 Thread Gavin Abo
Are you using WIEN2k 14.2 with the patch to clmchange.f [ http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg12523.html, https://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg12595.html ]? On 8/17/2015 2:39 AM, Avijeet Ray wrote: Dear Wien2k community and Prof.

Re: [Wien] dstart error

2015-06-29 Thread Gavin Abo
ferroelectric LiNbO3 (R spacegroup - 161 R3c) [ http://arxiv.org/abs/cond-mat/9902274v1 ] Hexagonal Coordinates : Rhombohedral Coordinates* Nb (0,0,0) : (0,0,0) Li (0,0,0.28): (0.28,0.28,0.28) O(0.049,0.346,0.067) :

Re: [Wien] dstart error

2015-06-30 Thread Gavin Abo
are not consistent with space group *From:* wien-boun...@zeus.theochem.tuwien.ac.at [wien-boun...@zeus.theochem.tuwien.ac.at] on behalf of Gavin Abo [gs...@crimson.ua.edu] *Sent:* 29 June 2015 22:19 *To:* A Mailing list

Re: [Wien] SOC and U calculation

2015-08-04 Thread Gavin Abo
I don't know everything about DFT+U+SO calculations, but I will try to answer your questions. See below. Dear users I am intended to perform FM+U+SOC calculation for Ca2CoSiO7. The step that I understood to perform for such calculations are: 1. run simple SCF with LDA using spin polarized

Re: [Wien] 100+ atomic numbers

2015-08-06 Thread Gavin Abo
It might help if you mention specifically which atomic number you are try to use. Also, the error occurs when the struct file is read by what (StructGen, lapw0, ...)? What is the exact error message given by the program? You can specify elements to atomic number 103 in StructGen. If you

Re: [Wien] structure-optimization

2015-08-05 Thread Gavin Abo
Read section 5.3 Structure optimization starting on page 69 in the WIEN2k 14.2 usersguide [ http://www.wien2k.at/reg_user/textbooks/usersguide.pdf ]. If none of the options does what you want, then you have do each structure change manually or write your own script(s) to automate your

Re: [Wien] structure-optimization

2015-08-07 Thread Gavin Abo
I run the volume optimization with that script but there is two question? 1- Did the lattice obtain from equation of state, optimized with both degree of freedoms (lattice parameter and atomic position) ? After running the script optimize.job containing min_lapw, you can try getting the EOS

Re: [Wien] Control of very small fraction of atoms in alloy

2015-08-13 Thread Gavin Abo
You might be interested in the concentration x study of Al1-xTix using ATAT@WIEN2k [1,2]. Unfortunately, the amadm.unileoben.ac.at website that hosted the ATAT@WIEN2k package at the link on the unsupported page [3] was shutdown after the group moved. Although, you can still view some of the

Re: [Wien] question on irrep (irreducible representation) calculation

2015-08-13 Thread Gavin Abo
Yes, the WILL BE IMPLEMENTED message in your email seems to clearly indicate that the more complicated group theory is still not implemented in WIEN2k 14.2 [ http://www.wien2k.at/reg_user/limitations/ ]. For a non-spin polarized calculation with spin-orbit, I think you can still find whether

Re: [Wien] Mailing List Removal

2015-08-09 Thread Gavin Abo
You should be able to unsubscribe any time you want by using the link to the webpage at the bottom of one of the mailing list emails (i.e., http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien ). The Unsubscribe or edit options function on the webpage is not working for you? On 8/9/2015

Re: [Wien] problem with w2w

2015-07-21 Thread Gavin Abo
You might want to try my patch (w2w_main.patch), which you can get at https://github.com/gsabo/WIEN2k-Patches/tree/master/14.2 (click WIEN2k-Patches and Download ZIP)? I think this will improve the error message in w2w.error from what you got to: 'w2w' - can't open definition file w2w.def

Re: [Wien] Error in write_inwf when running init_w2w

2015-07-21 Thread Gavin Abo
It looks like the caret is pointing to the python as keyword. What version of python are you using? You can probably check with the following terminal command (of note, V should be uppercase): python -V It seems that python version 2.6 or newer is needed in order to recognize the as keyword

Re: [Wien] problem with w2w

2015-07-21 Thread Gavin Abo
. Your build may be incomplete. where does it go wrong? Thanks again Patrik From: *Gavin Abo* gs...@crimson.ua.edu mailto:gs...@crimson.ua.edu Date: Tue, Jul 21, 2015 at 5:34 PM Subject: Re: [Wien] problem with w2w To: A Mailing list for WIEN2k users wien@zeus.theochem.tuwien.ac.at mailto:wien

Re: [Wien] running calculation

2015-07-13 Thread Gavin Abo
You might also want to search and read about .stop (to safely stop an scf cycle before a time limit or scheduled interruption like a power outage) and -s PROGRAM (to start from a previously good program step if killed by a time limit or unscheduled interruption) in the WIEN2k usersguide. On

Re: [Wien] Wien2k installation problem

2015-07-14 Thread Gavin Abo
current:DPARALLEL:'-DParallel' current:R_LIBS:-L/opt/intel/mkl/lib/mic -lmkl_lapack95_lp64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -openmp -lpthread We are eagerly awaiting fruitful responses. Thanks in advance. with regards, On Tue, Jul 7, 2015 at 11:31 PM, Gavin Abo gs...@crimson.ua.edu mailto:gs

Re: [Wien] K-points for Band structure

2015-07-20 Thread Gavin Abo
The format of the xcrysden.klist file that you attached seems not fine. It looks like you might have selected in the top menu of XCrySDen Tools-k-path Selection and saved it in .kpf format. You need to click the Generate k-mesh using XCrysden button in w2web or select in the top menu of

Re: [Wien] lattice parameters not consistent with the space group

2015-07-20 Thread Gavin Abo
R lattice spacegroups are specified in WIEN2k (using StructGen) with mixed settings, where the lattice parameters (lattice constants and angles) should be entered in the hexagonal setting while the nonequivalent atomic positions should be entered in the rhombohedral setting [1,2]. If you

Re: [Wien] Wien2k installation problem

2015-07-15 Thread Gavin Abo
Dear Gerhard and Shamik, Ok, sorry, I did not think too much into it. In siteconfig, 1) selected S specify a system and ILinux (Intel ifort compiler (12.0 and later) + mkl ) 2) selected O specify compiler options, BLAS and LAPACK, and it gave: Recommended options for system linuxifc

Re: [Wien] Band labeling

2015-10-26 Thread Gavin Abo
Take the TiC calculation for example (TiC.tar.gz). In TiC.tar.gz, there is the file "TiC.spaghetti_ene". In that file, you should see the lines: bandindex: 5 ... 0.0 0.0 0.0 1.20853 -12.4 ... bandindex: 6 ... 0.0 0.0 0.0 1.20853

Re: [Wien] need your help

2015-10-26 Thread Gavin Abo
Dear Sir Gavin Abo Thanks sir for your help. Regards Sikander On Sun, Oct 25, 2015 at 6:55 PM, Gavin Abo <gs...@crimson.ua.edu <mailto:gs...@crimson.ua.edu>> wrote: Search the mailing list archive [ http://www.mail-archive.com/wien@ze

Re: [Wien] x w2w error in WIEN2k.14

2015-10-27 Thread Gavin Abo
commad "file nn" in $WIENROOT and it gave me the information about bit of nn. nn: ELF 64-bit LSB executable, AMD x86-64, version 1 (SYSV), for GNU/Linux 2.6.9, dynamically linked (uses shared libs), for GNU/Linux 2.6.9, not stripped Bests Fang 2015-10-27 15:33 GMT+08:00 Gav

Re: [Wien] x w2w error in WIEN2k.14

2015-10-27 Thread Gavin Abo
That error usually happens if the w2w executable file is compiled on a 64 bit operating system, but then it is copied and ran on a 32 bit operating system [ https://www.dartmouth.edu/~rc/classes/softdev_linux/32-64bit.html ]. You can probably use the Linux 'file' command [

Re: [Wien] Need help to resolve the QTL-B.GT.15., Ghostbands problem

2015-10-26 Thread Gavin Abo
See: http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg09303.html http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg06270.html On 10/26/2015 9:19 AM, sikander Azam wrote: Dear All Please help me that how to solve the following problem Error in LAPW2 'l2main' -

Re: [Wien] need your help

2015-10-25 Thread Gavin Abo
Search the mailing list archive [ http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/ ]. When E-bottom and E-top are both -200, that typically indicates that something is likely wrong with the struct file [ http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg10860.html

Re: [Wien] Need your help

2015-10-21 Thread Gavin Abo
Did you check the error files (cat *.error) [ https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg12460.html ]? Is your case.inorb and case.indm(c) files okay [ http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg10408.html ]? On 10/21/2015 4:27 AM, sikander Azam

Re: [Wien] CHARGE DENSITY --> TOTAL CHARGE

2015-10-08 Thread Gavin Abo
For XCrySDen, you should be able to save the 3D density as an xsf file [1-3]. You should be able to change the Norm. Flag in XCrySDen from valence (VAL) to total (TOT) [4]. If you use wien2venus.py: If you run "wien2venus.py -h" in a terminal, it should show you that the -S flag is needed

Re: [Wien] Wrong band structure

2015-10-05 Thread Gavin Abo
If you click on "run SCF" in the left menu of w2web, are the "parallel", "spinorbit", "spin polarized", and "orbital pot (DFT+U)" boxes checked on the SCF Cycle page? If not, you can check the boxes next to them (except "parallel" might have to be changed using "change session" in the left

Re: [Wien] UP spin and DN spin occupation

2015-10-08 Thread Gavin Abo
Look in the case.scf file to see if there are two :QTLxxx lines written per iteration in the case.scf file [1,2]. For example: - :ITE001: 1. ITERATION - ... :PCS001: PARTIAL CHARGES SPHERE = 1 S,P,D,F, D-EG,D-T2G :QTL001: 1.0401 3.0065 3.9611

Re: [Wien] Error in spin orbit coupling calculation

2015-07-10 Thread Gavin Abo
The lapw1c_mpi and lapw1_mpi are for mpi parallel, and the lapw1c and lapw1 difference is described in section 7.5 LAPW1 (generates eigenvalues and eigenvectors) of the WIEN2k 14.2 usersguide on page 116 [ http://www.wien2k.at/reg_user/textbooks/usersguide.pdf ]. It is recommended to follow

Re: [Wien] commlib error

2015-07-10 Thread Gavin Abo
An additional comment, in the post at: https://arc.liv.ac.uk/pipermail/gridengine-users/2010-October/032729.html You can see that they have the error of the form: error: commlib error: got select error (Connection reset by peer) error: executing task of job x failed: failed sending task to

Re: [Wien] Need your help

2015-07-10 Thread Gavin Abo
You can read on the WIEN2k-FAQ: QTL-B page (link in the post at http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg09989.html ) about what it means to have an E-top -200.0 (like in your error message). In order to diagnosis why it could not find E-TOP, you should look at

Re: [Wien] Error in spin orbit coupling calculation

2015-07-12 Thread Gavin Abo
...@mail.ru wrote: On 12.07.2015 12:31, Paresh Chandra Rout wrote: And I have also attached some files of my system . Still: Gavin Abo The given information is not enough to help. 1) File case.inso is under greatest suspicion, check and send it. 2) make in terminal x

Re: [Wien] generate bxsf format files

2015-08-26 Thread Gavin Abo
Right-click in the Fermi surface window, then select File - Save Fermi Surface(s) in BXSF format. ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at:

Re: [Wien] DFT+U

2015-08-27 Thread Gavin Abo
Check case.outputorb[up/dn]. It looks like they are written there based on a previous post [ http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg06463.html ]. Your BiFeReO6.inorb file looks problematic. It is important how you set natorb [

Re: [Wien] Regarding symmetry change

2015-08-27 Thread Gavin Abo
I am solving monoclinic structure having space space group P21/m (no. 11). My unique axis is b. But there are 3 space groups of type P21/m at 11 number. Whatever I select out of these space group it shows unique axis c. I don’t understand why are these 3 same sgroups at the same position ?

Re: [Wien] Eorb =0 in LDA+U case.outputfiles

2015-08-28 Thread Gavin Abo
I don't see any lines in your BiFeReO6.outputorb[up/dn] like: Atom 9 L= 2 U= 0.300 J= 0.000 Ry Atom 10 L= 2 U= 0.300 J= 0.000 Ry So there might still be a problem with your BiFeReO6.inorb file. Did you adjust BiFeReO6.inorb and do the scf calculation again? If you only want to apply U

Re: [Wien] Error in DSTART: 'ROTDEF' - no symmetry operation found.

2015-08-27 Thread Gavin Abo
I ran x nn on the supercell1 file that you sent in WIEN2k 14.2 and it fails: username@computername:~/Desktop/KTiOPO4$ ls supercell1 username@computername:~/Desktop/KTiOPO4$ mv supercell1 KTiOPO4.struct username@computername:~/Desktop/KTiOPO4$ x nn specify nn-bondlength factor: (usually=2) [and

Re: [Wien] (no subject)

2015-09-04 Thread Gavin Abo
15 8:38 AM, Dr. K. C. Bhamu wrote: Dear Gavin Abo I satisfied with your previous reply but just for query I have another question. I checked TiC.outputm file as mentioned on page no 73 of UG for grep..WARN. its shows root@lenovopc:~/wien_work/excercise/TiC# grep :WARN TiC.outputm

Re: [Wien] Basic query like a beginner

2015-09-03 Thread Gavin Abo
See comments below: *For TiC* (I already posted this query few month ago and got a quick reply from Prof. Marks) http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg12624.html Reply from Prom Marks was "You do not have a problem! The charge convergence is very sensitive to

Re: [Wien] EFG dependence on magnetic field

2015-09-03 Thread Gavin Abo
To apply external magnetic field Bext inside atomic sphere [1-3] and control its direction, see the section "Input for interaction with Bext (nmod=3)" on page 113 in section "7.3.3 Input" of the WIEN2k 14.2 usersguide [4]. [1]

Re: [Wien] EFG dependence on magnetic field

2015-09-07 Thread Gavin Abo
Yes On 9/7/2015 1:55 AM, Muhammad Sajjad wrote: Dear Gavin Bundle of thanks for such a helping reply. Are the case.inorb and case.indm files are ok now for B-ext applied at 32 degree angle with x-axis? == case.inorb = 3 2 0 nmod, natorb, ipr PRATT 1.0

Re: [Wien] w2web: 'no command found'

2015-09-07 Thread Gavin Abo
Is $WIENROOT defined in the terminal (echo $WIENROOT)? Does the symbolic link for w2web exist in $WIENROOT and w2web script in $WIENROOT/SRC_w2web (ls -l $WIENROOT/w2web $WIENROOT/SRC_w2web/w2web)? On 9/7/2015 4:17 AM, Naseem Hassan wrote: Dear All, Kindly help us understanding this strange

Re: [Wien] EFG dependence on magnetic field

2015-09-05 Thread Gavin Abo
See comments below: Thank you very much for your prompt response. What I understood is 1. run init_lapw 2. add case inorb and case.indm files with format as (I have two magnetic ions Co) == case.inorb = 31 0 nmod, natorb, ipr

Re: [Wien] Energy vs Volume is linear!

2015-09-08 Thread Gavin Abo
It looks like it is starting to curve at the volume of 10575.3364. So you probably need calculations at smaller volumes. On 9/8/2015 7:43 PM, Marzieh Gh wrote: Dear Prof.Blaha & Tran I have calculated optimization of supercell (1*1*2). But Energy vs Volume is linear! case.outputeos:

Re: [Wien] Stop!

2015-09-02 Thread Gavin Abo
Perhaps someone else understands your question; if not, you need to rephrase your question or provide more details on where it got stuck in the script. What I can tell you is that if you run init_lapw or initso_lapw and use Ctrl+Z before it completes, it is normal for the process to stop

Re: [Wien] EFG dependence on magnetic field

2015-09-06 Thread Gavin Abo
Many thanks for your guidance. Actually my system has magnetic (2) and non-magnetic (3) species. As B_ext. means we are apply magnetic field on the whole system then why do we need to select natorb = 2 ? Bext is applied to the iatoms (i.e., in atomic spheres) that you specify in case.inorb.

Re: [Wien] Si under strain

2015-09-10 Thread Gavin Abo
http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg02749.html On 9/10/2015 7:33 AM, Muhammad Sajjad wrote: Actually I downloaded structure from COD base. So you are write its space group is fd3m and structure is Title F LATTICE,NONEQUIV.ATOMS: 1 227_Fd-3m MODE OF CALC=RELA

Re: [Wien] berryPI code

2015-09-09 Thread Gavin Abo
My guess is that the problem is coming from an inconsistency in the input files (case.energysoup or ?) or a code bug is causing I to become larger than the size nmat of BKX(I), BKY(I), or BZX(I), such that it is indexing out of an array. To check if that is what is happening, I would try

Re: [Wien] Please help in Wien 2k setup

2015-09-17 Thread Gavin Abo
You need to explain where you are in the setup and what the problem (error message) is. On 9/17/2015 9:51 AM, Mohammed S. Mohammed wrote: Please help!! I have a work station Dell Precision T5500 with two processors each 6 core and 16 G-Ram. The problem that i can not complete the Wien 2k

Re: [Wien] time difference among nodes

2015-09-29 Thread Gavin Abo
From the top's sent before, it looks like the administrators might have configured the system with no swap: r1i1n2 Swap:0M total,0M used,0M free,10563M cached r1i1n3 Swap:0M total,0M used,0M free,23089M cached Keep in mind that having

Re: [Wien] Compilation error

2015-10-01 Thread Gavin Abo
ld: cannot find -lmkl_scalapack_lp64 In particular, it cannot find the scalapack library file (libmkl_scalapack_lp64.so). Your environment variables are probably set correctly, else you would probably have more errors. The libmkl_scalapack_lp64.so used to be installed by default, but they

Re: [Wien] SOC DOS Error

2015-09-28 Thread Gavin Abo
Did you run the lapw1 steps before that [ http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg11340.html ]? On 9/28/2015 8:01 AM, Paresh Chandra Rout wrote: Dear all, While doing *DOS* calculation in *spin-orbit coupling *case, I encounter with an error with message running

Re: [Wien] berryPI code

2015-09-09 Thread Gavin Abo
What is the output of Elias's grep command on your system? For example, in a terminal, you should see something like: username@computername:~/Desktop$ grep Id: $WIENROOT/SRC_w2w/{almgen.F,l2mmn.f,main.f} /home/username/WIEN2k/SRC_w2w/almgen.F:!!! $Id: almgen.F 167 2014-02-03 09:43:33Z assmann

Re: [Wien] Si under strain

2015-09-09 Thread Gavin Abo
Did you send the wrong scfmbj.struct? At least for me, "x nn" of WIEN2k 14.2 gives WARNINGS that the struct file is not okay. username@computername:~/wiendata/scfmbj$ ls scfmbj.struct username@computername:~/wiendata/scfmbj$ x nn specify nn-bondlength factor: (usually=2) [and optionally

Re: [Wien] Problem with aim.def

2015-09-18 Thread Gavin Abo
If you initialize and do a calculation in /home/bruno/Wien2k/hpn_final, then "save_lapw -d hpn_final_converged", you should not do a calculation in the save_lapw subdirectory. See the WIEN2k usersguide. You can "restore_lapw -d hpn_final_converged" and do further calculations in

Re: [Wien] query regarding opticplot

2015-09-20 Thread Gavin Abo
Example in a bash ($) terminal: username@computername:~/test$ cat test.joint #2 Vol = 421.5088774080 # Energy [eV] Im_eps_xx Im_eps_zz # 0.0 0.2500E+00 0.E+00 1.0 0.5000E+00 0.5000E+00

Re: [Wien] Problem with aim.def

2015-09-18 Thread Gavin Abo
If $ is the bash terminal. It seems like you might have just did (while in the case directory): $ aim However, if you see the WIEN2k 14.2 usersguide on page 134 in section "8.1.1 Execution" [ http://www.wien2k.at/reg_user/textbooks/usersguide.pdf ]. The command needs to be: $ x aim or

Re: [Wien] Compilers

2015-09-18 Thread Gavin Abo
I don't have the same hardware. So I cannot determine the best performance for your system. You can run your own benchmarks to determine the best performance. The benchmark page on the WIEN2k website has a serial or parallel benchmark that you can download [

Re: [Wien] Problem with aim.def

2015-09-18 Thread Gavin Abo
I do a quick test in a bash ($) terminal and this is what I get: username@computername:~/Desktop/test$ pwd /home/username/Desktop/test <= What is your full path? If it is long, try shorting it. Is your directory name "hpn_final_converged" or this the name cutoff?

Re: [Wien] x lapw2 parallel problem

2015-09-19 Thread Gavin Abo
You might want to see the post at http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg04029.html where Prof. Blaha mentions that "x lapw2 -qtl -p" works differently from "x lapw2 -p". That "x lapw2 -p -qtl" will run only ONE job (on one processor), but it should use the parallel

Re: [Wien] partial DOS

2015-09-21 Thread Gavin Abo
See the posts: http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg10872.html http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg10873.html On 9/21/2015 11:35 AM, Seyyed Amir Abbas Emami wrote: ​ dear uses I am trying to calculate DOS of compound with

Re: [Wien] Eorb =0 in LDA+U case.outputfiles

2015-08-28 Thread Gavin Abo
PM, Gavin Abo gs...@crimson.ua.edu mailto:gs...@crimson.ua.edu wrote: I don't see any lines in your BiFeReO6.outputorb[up/dn] like: Atom 9 L= 2 U= 0.300 J= 0.000 Ry Atom 10 L= 2 U= 0.300 J= 0.000 Ry So there might still be a problem with your BiFeReO6.inorb file

Re: [Wien] Molecular dynamics using Wien2k

2015-12-17 Thread Gavin Abo
I haven't tried MD with min_lapw. The case.finM should be created by the script min_lapw [ http://zeus.theochem.tuwien.ac.at/pipermail/wien/2006-May/007135.html ]. One of the other users might know better, but it looks like your "min_lapw -p -so" command does not look right. I suggest you

Re: [Wien] Error in lapw2 running in the LDA+U calculation in parallel mode

2016-01-01 Thread Gavin Abo
Since the crash happens in lapw2, in the lapw2para_lapw script file, it looks like messages might be written to the .time2_*, .stdout2_*, or :parallel files depending on the settings in your parallel_options and .machines file. So you could try checking for error messages in these files with

Re: [Wien] difference between Wien2k tar file and wien2k executable file

2015-12-26 Thread Gavin Abo
The first one, the tar package, contains the source code, but it has no executable files. The source code can be compiled to create executable files (32 bit or 64 bit). The second one, the executable package, contains the executable files (only 64 bit), but it has no source code. The

Re: [Wien] uplapw1.error for SO

2015-12-26 Thread Gavin Abo
http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg13206.html http://www.mail-archive.com/wien%40zeus.theochem.tuwien.ac.at/msg12625.html On 12/26/2015 6:19 AM, Tarek Hammad wrote: Dear all I am running SO calculations for SmFe2. However, for spin-polarised caculations I have no

Re: [Wien] (no subject)

2015-12-24 Thread Gavin Abo
You probably compiled WIEN2k as a 32 bit application on a 64 bit Ubuntu. So when it tries to load the 64 bit libfftw3.so.3, it gives that error because it needs and cannot find the 32 bit libfftw3.so.3 [

Re: [Wien] In1.file

2015-12-26 Thread Gavin Abo
From K. Schwarz's presentation titled "From APW to LAPW to (L)APW+lo" [ http://www.wien2k.at/events/ws2006/ws06-schwarz.pdf ]: * use APW+lo for states, which are difficult to converge: (f or d-states, atoms with small spheres) * use LAPW+LO for all other atoms and angular momenta On

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