Bizarrely now it's working. Or maybe not so bizarrely. It turned out there was an antique version of blastall in a part of the path that took precedence over version 2.2.4.

I still have that ACT question, though. Do I need to set a flag somewhere to tell it to expect a blastall -m 8 tab-delimited table instead of space-delimited MSP Crunch output?

Thanks for bearing with me!

anja

--
Angela M. Baldo, PHD
Microbial Food Safety
ERRC, NAA
ARS, USDA
600 East Mermaid Lane
Wyndmoor, PA 19038-8598

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