Hi again,

Now that the festive season is well and truly over, I wonder if
anyone can help me out with my question (see below).

many thanks!
Bob.

Bob MacCallum writes:
 > 
 > Hi all,
 > 
 > I've been looking at the demo of BASE 1.2 at Lund and I can't figure out one
 > thing - but perhaps I'm being stupid and have missed something.
 > 
 > 
 > Let's say I have hybridisation X (condition X vs. control) and
 > hybridisation Y (condition Y vs. control).
 > 
 > How would I set up a filter which would "give me all the genes/reporters that
 > are at least A times overexpressed in hyb. X AND at least B times
 > underexpressed in hyb. Y"?
 > 
 > The filters don't seem to apply an AND across multiple data sets.  Also, I
 > don't see how you combine biological and technical replicates into one data
 > set.
 > 
 > Do people normally do this type of analysis with plugins or external 
 > software?
 > 
 > many thanks,
 > Bob.
 > 
 > -- 
 > Bob MacCallum | VectorBase Developer | Kafatos/Christophides Groups |
 > Division of Cell and Molecular Biology | Imperial College London |
 > Phone +442075941945 | Email [EMAIL PROTECTED]
 > 
 > 
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-- 
Bob MacCallum | VectorBase Developer | Kafatos/Christophides Groups |
Division of Cell and Molecular Biology | Imperial College London |
Phone +442075941945 | Email [EMAIL PROTECTED]


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