Hi, I assume you are referring to the BASE 2 implementation of lowess. The lowess plug-in is a part of the BASE core and is available in source form in the source package downloadable from the base web site. You can browse the code at http://base.thep.lu.se/browser/trunk/src/plugins/core/net/sf/basedb/plugins/LowessNormalization.java
We have no reported issues with the plug-in but we have not tested 244k arrays. It may be out of memory issues, can you check the logs for messages related to the problem. Jari George Wu wrote: > Dear All: > > I am using Base Lowess program to normalize my Microarray data. But seems it > works with my small dataset input (e.g. 44k-probe records). But it doesn't > work with my big data input file (e.g. 244K-probe array). > > So does Lowess have data file size limitation? If so, how can I fix it? By > the way, I only have the executable? Is there any way I could get source > code? > > Thank you very much, > > George > ------------------------------------------------------------------------- This SF.net email is sponsored by DB2 Express Download DB2 Express C - the FREE version of DB2 express and take control of your XML. No limits. Just data. Click to get it now. http://sourceforge.net/powerbar/db2/ _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to [EMAIL PROTECTED]
