On Sun, Dec 16, 2012 at 1:16 PM, Henrik Bengtsson <h...@biostat.ucsf.edu> wrote: > >From http://stat.ethz.ch/R-manual/R-devel/NEWS: > > "It is intended that this version will be released as R 3.0.0." > > > They've already changed the R-devel version number from 2.16.0 to > 3.0.0, which causes biocLite() et al. to fail, e.g. > >> source("http://www.bioconductor.org/biocLite.R";) > Installing package into 'C:/Users/hb/R/win-library/3.0' > (as 'lib' is unspecified) > Warning: unable to access index for repository > http://www.bioconductor.org/packa > ges/2.12/bioc/bin/windows/contrib/3.0 > > package 'BiocInstaller' is available as a source package but not as a > binary > > 'biocLite.R' failed to install 'BiocInstaller', use > 'install.packages("BiocInstaller", > repos="http://www.bioconductor.org/packages/2.12/bioc";)' > Warning message: > package 'BiocInstaller' is not available (for R Under development) >
This now works. Note that we have not yet updated our devel build machines to R-3.0.0, so there may be binary incompatibilities in Windows and Mac packages. If in doubt, install from source. Dan > /Henrik > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
