On Sun, Dec 16, 2012 at 10:42 PM, Dan Tenenbaum <dtene...@fhcrc.org> wrote: > On Sun, Dec 16, 2012 at 1:16 PM, Henrik Bengtsson <h...@biostat.ucsf.edu> > wrote: >> >From http://stat.ethz.ch/R-manual/R-devel/NEWS: >> >> "It is intended that this version will be released as R 3.0.0." >> >> >> They've already changed the R-devel version number from 2.16.0 to >> 3.0.0, which causes biocLite() et al. to fail, e.g. >> >>> source("http://www.bioconductor.org/biocLite.R") >> Installing package into 'C:/Users/hb/R/win-library/3.0' >> (as 'lib' is unspecified) >> Warning: unable to access index for repository >> http://www.bioconductor.org/packa >> ges/2.12/bioc/bin/windows/contrib/3.0 >> >> package 'BiocInstaller' is available as a source package but not as a >> binary >> >> 'biocLite.R' failed to install 'BiocInstaller', use >> 'install.packages("BiocInstaller", >> repos="http://www.bioconductor.org/packages/2.12/bioc")' >> Warning message: >> package 'BiocInstaller' is not available (for R Under development) >> > > This now works. > > Note that we have not yet updated our devel build machines to R-3.0.0, > so there may be binary incompatibilities in Windows and Mac packages. > If in doubt, install from source.
That was quick - I've confirmed that it works with one package. Thanks. Henrik > > Dan > > >> /Henrik >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel