Hi Dan, Thank you for developing this KEGGREST package, this package is very helpful.
By the way, I have developed my own KEGGREST package for the same purpose as your KEGGREST. https://github.com/kozo2/KEGGREST I would like to contribute your KEGGREST package. Is there github's pull request-like system in bioc devel? Thanks, Kozo > Hi Bioconductors, > > The KEGGREST package is now available in devel (Bioconductor 2.12). > > http://www.bioconductor.org/packages/devel/bioc/html/KEGGREST.html > > KEGGREST is intended to replace the KEGGSOAP package, which is now deprecated. > KEGGSOAP does not work since KEGG shut down its SOAP server at the end > of 2012. Information about the transition from SOAP to REST is here: > > http://www.genome.jp/kegg/soap/ > > KEGGREST is designed to closely follow the KEGG REST API which is > documented here: > > http://www.kegg.jp/kegg/docs/keggapi.html > > The REST interface is simpler and in some ways more powerful than the > old SOAP interface. > However, there is some functionality in the SOAP API which KEGG did > not port to the REST API. > > KEGGREST is in devel, which means it is still subject to change. > > We welcome feedback about this package. > > Thanks, > Dan -- Kozo Nishida knish...@riken.jp Laboratory for Biochemical Simulation OLABB, Osaka University 6-2-3, Furuedai, Suita, Osaka 565-0874, JAPAN Quantitative Biology Center, RIKEN Tel: +81-70-6800-3899 _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
