Hi, Convenience wrappers %over% and %within% (wrappers for overlapsAny()) are in IRanges 1.17.26. Warnings and deprecation messages for %in% between range-based objects have been modified to suggest the use of %over% as a replacement (instead of overlapsAny()).
Please let me know if you have any question about this. Thanks, H. _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel