You cannot. All dependencies of Bioconductor packages must be available in CRAN
or Bioconductor.
You could ask the maintainer of that package to submit it to CRAN or
Bioconductor.
Alternatively you could minimize the dependence on it so that code that depends
on it is only run if
require("cellomics") evaluates to TRUE. You would put
Enhances: cellomics
in your DESCRIPTION file if you choose to do this. It would be up to end users
of the package to install the cellomics package themselves but you can describe
how to do this in your documentation. If you do this, your essential
functionality (vignettes, tests, man pages) needs to work without access to the
cellomics package. Note that the Bioconductor build system will not install the
cellomics package.
Or simply don't use the package at all.
Dan
----- Original Message -----
> From: "Diana LOW" <d...@imcb.a-star.edu.sg>
> To: "bioc-devel" <bioc-devel@r-project.org>
> Sent: Thursday, February 25, 2016 8:45:34 PM
> Subject: [Bioc-devel] Using non-CRAN/Bioc package
> Hi,
>
> I am trying to use a non-CRAN/Bioc (https://gitlab.com/al22/r-cellomics) in my
> package.
>
> This has failed the BUILD check upon submission because the package is not
> available.
>
> Any suggestion on how I can do this?
>
> Thanks!
>
> Regards,
>
> Diana Low, Ph.D.
> Senior Research Fellow, EG Lab
> Institute of Molecular and Cell Biology (IMCB)
> 61 Biopolis Drive
> Proteos #03-06
> Singapore 138673
>
> d...@imcb.a-star.edu.sg
> http://www.eglab.org/
>
>
>
> Note: This message may contain confidential information. If this Email/Fax has
> been sent to you by mistake, please notify the sender and delete it
> immediately. Thank you.
>
> [[alternative HTML version deleted]]
>
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