And I realized this since I am currently updating these packages in devel following a change in minfi (where I move from eSet to SummarizedExperiment without GRanges).
Best, Kasper On Fri, Dec 9, 2016 at 10:51 AM, Kasper Daniel Hansen < kasperdanielhan...@gmail.com> wrote: > It got added to the wrong repos. > > You'll see it matches the other > FlowSorted.XX.450k packages > of which there are 3 experimental packages with different values of XX > (Blood, CordBlood, DLPFC). This is reference data for 450k experiments on > sorted (isolated) cell types. It is experimental data, but it is kind of > used in a annotation-like manner, for example in the estimateCellTypes > function in minfi where you basically take > own samples + reference data > and get cell type composition estimates. Since it is experiment data, I > think the right place is the experiment data part of the repos (the > packages are also big). > > Best, > Kasper > > On Fri, Dec 9, 2016 at 10:48 AM, Obenchain, Valerie <Valerie.Obenchain@ > roswellpark.org> wrote: > >> Can you give me some background? Was this recently added or did it get >> added to the wrong repo? >> >> Val >> >> >> On 12/09/2016 07:42 AM, Kasper Daniel Hansen wrote: >> > The package >> > FlowSorted.CordBloodNorway.450k >> > should be moved from Annotation to ExperimentData. Not sure how to do >> this. >> > >> > Best, >> > Kasper >> > >> > [[alternative HTML version deleted]] >> > >> > _______________________________________________ >> > Bioc-devel@r-project.org mailing list >> > https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > >> >> >> >> This email message may contain legally privileged and/or confidential >> information. If you are not the intended recipient(s), or the employee or >> agent responsible for the delivery of this message to the intended >> recipient(s), you are hereby notified that any disclosure, copying, >> distribution, or use of this email message is prohibited. If you have >> received this message in error, please notify the sender immediately by >> e-mail and delete this email message from your computer. Thank you. >> > > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
