Also, I helped prepare the package for submission. If you need a clean repos or something to move it over, I am happy to provide that. I am also happy to provide an updated repos, with the stuff I am planning to fix.
On Fri, Dec 9, 2016 at 10:53 AM, Kasper Daniel Hansen < kasperdanielhan...@gmail.com> wrote: > And I realized this since I am currently updating these packages in devel > following a change in minfi (where I move from eSet to SummarizedExperiment > without GRanges). > > Best, > Kasper > > On Fri, Dec 9, 2016 at 10:51 AM, Kasper Daniel Hansen < > kasperdanielhan...@gmail.com> wrote: > >> It got added to the wrong repos. >> >> You'll see it matches the other >> FlowSorted.XX.450k packages >> of which there are 3 experimental packages with different values of XX >> (Blood, CordBlood, DLPFC). This is reference data for 450k experiments on >> sorted (isolated) cell types. It is experimental data, but it is kind of >> used in a annotation-like manner, for example in the estimateCellTypes >> function in minfi where you basically take >> own samples + reference data >> and get cell type composition estimates. Since it is experiment data, I >> think the right place is the experiment data part of the repos (the >> packages are also big). >> >> Best, >> Kasper >> >> On Fri, Dec 9, 2016 at 10:48 AM, Obenchain, Valerie < >> valerie.obench...@roswellpark.org> wrote: >> >>> Can you give me some background? Was this recently added or did it get >>> added to the wrong repo? >>> >>> Val >>> >>> >>> On 12/09/2016 07:42 AM, Kasper Daniel Hansen wrote: >>> > The package >>> > FlowSorted.CordBloodNorway.450k >>> > should be moved from Annotation to ExperimentData. Not sure how to do >>> this. >>> > >>> > Best, >>> > Kasper >>> > >>> > [[alternative HTML version deleted]] >>> > >>> > _______________________________________________ >>> > Bioc-devel@r-project.org mailing list >>> > https://stat.ethz.ch/mailman/listinfo/bioc-devel >>> > >>> >>> >>> >>> This email message may contain legally privileged and/or confidential >>> information. If you are not the intended recipient(s), or the employee or >>> agent responsible for the delivery of this message to the intended >>> recipient(s), you are hereby notified that any disclosure, copying, >>> distribution, or use of this email message is prohibited. If you have >>> received this message in error, please notify the sender immediately by >>> e-mail and delete this email message from your computer. Thank you. >>> >> >> > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
