Dear BiocDevel : I got confused about the message from R CMD BiocCheck, and R CMD check on my packages. Precisely speaking, R CMD check throws an error that my unit test is failed, zero warning, 2 notes; instead R CMD BiocCheck complain with one error that no runnable example found, one warning (I don't undersand this warning, becuase R CMD check doesn't report this), 4 notes. I don't understand the result of R CMD BiocCheck, can't figure out the exact issue . However, result of R CMD check is more clear and self-explanatory. I did add example for each of my function, R CMD check okay with it, but R CMD BiocCheck complain about this, Why ? How to address the issues raised by R CMD BiocCheck ? R CMD BiocCheck gave me following message :
$error [1] "At least 80% of man pages documenting exported objects must have runnable examples. The following pages do not:" $warning [1] "Add non-empty \\value sections to the following man pages: man/filterBycombStringency.Rd" Plus, I tried to attach bibliography.bib files on my package's vignette, but Rstudio didn't print out the bibliography information at the end of .Rmd file. How can I make this happen ? I did push all recent changes to github <https://github.com/julaiti/MSPC>, so everything is synchronized. Is that possible to kindly ask Bioconductor team to briefly review my packages and getting valuable opinion to improve my work? I am grad students and very few experiences in Bioinformatics field (not in this major), so my very first R package might have a lot of issues, getting possible contribution would be highly appreciated. Many thanks to Bioconductor team. Best regards : -- Jurat Shahidin Dipartimento di Elettronica, Informazione e Bioingegneria Politecnico di Milano Piazza Leonardo da Vinci 32 - 20133 Milano, Italy Mobile : +39 3279366608 <+39%20327%20936%206608> [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
