Dear all,
we're experiencing WARNINGS in xcms on Tokay2 that are all related to links in
Rd files to functions and methods in other packages.
Example:
we have \code{\link[MSnbase]{pickPeaks}} in XCMSnExp-inherited-methods.Rd that
links to the method in MSnbase, that works nicely on Linux and macOS build
machines, but on tokay2 we get:
Rd warning:
C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpw7qeJw/R.INSTALL1e704df56ca9/xcms/man/XCMSnExp-inherited-methods.Rd:59:
file link 'pickPeaks' in package 'MSnbase' does not exist and so has been
treated as a topic
is there any other solution to removing all links to external packages?
thanks, jo
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