Thanks so much Valerie and Kasper for the helpful comments...I will look into the issue as you suggested.
Best Kushal On Wednesday, 29 August 2018, Obenchain, Valerie < [email protected]> wrote: > Kasper is right, you can only update code in the current release (Bioc > 3.7) or devel (Bioc 3.8). Sorry I didn't read your question carefully > enough. You could, however, use the AMI suggested below to attempt to > reproduce the reported error. > > This is the last build report for Bioc 3.6 and Logolas is not broken: > > https://www.bioconductor.org/checkResults/3.6/bioc-20180412/ > > If you can reproduce the error (with the AMI) you probably did not have a > comprehensive set of tests which is why the build report is green. If you > can't reproduce the error, the people reporting problems may be using > mismatched R/Bioconductor package versions. The output of their > sessionInfo() should be informative. > > Valerie > > > > On 08/29/2018 09:45 AM, Kasper Daniel Hansen wrote: > > I think the "correct" answer to this, is that it is impossible. Old > releases are locked. > > The way to discover such things is to have appropriate test functions > which will signal an error if things break. > > Best, > Kasper > > On Tue, Aug 28, 2018 at 2:17 PM Obenchain, Valerie <Valerie.Obenchain@ > roswellpark.org> wrote: > >> You could use an AMI with R 3.4 installed. See the 'AMI IDs' section: >> >> https://www.bioconductor.org/help/bioconductor-cloud-ami/#ami_ids >> >> Valerie >> >> >> On 08/27/2018 11:48 AM, kushal kumar dey wrote: >> >> Hi, >> >> I just found based on user reports that the old version of my package >> Logolas for R 3.4 and Bioc 3.6 is broken. It does install fine but the >> main >> function does not run. Everything seems to be fine however for R 3.5 and >> Bioc 3.7. I would like to produce either an error message if someone < R >> 3.5 tries to install Logolas, or to mend the old version. Can you please >> let me know what is the procedure for either of these cases? >> >> Thanks so much. >> >> Kushal >> >> >> >> >> >> This email message may contain legally privileged and/or confidential >> information. If you are not the intended recipient(s), or the employee or >> agent responsible for the delivery of this message to the intended >> recipient(s), you are hereby notified that any disclosure, copying, >> distribution, or use of this email message is prohibited. If you have >> received this message in error, please notify the sender immediately by >> e-mail and delete this email message from your computer. Thank you. >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> [email protected] mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. -- Kushal K. Dey Graduate Student 5 th Year, Department of Statistics University of Chicago Contact: +1 312-709-0680 | [email protected] [[alternative HTML version deleted]] _______________________________________________ [email protected] mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
