Wow that was easy. Thanks Nitesh. git push upstream master Counting objects: 20, done. Delta compression using up to 4 threads. Compressing objects: 100% (20/20), done. Writing objects: 100% (20/20), 5.33 KiB | 1.33 MiB/s, done. Total 20 (delta 14), reused 0 (delta 0) To git.bioconductor.org:packages/rgsepd 4715839..b7aad7a master -> master
I didn't find that command in the half-dozen different bioconductor developers tutorials, and 'git push' just kept telling me everything was up to date. I started this package a few years ago when Bioc used SVN, and have been confused ever since they moved to git and recommended I make a github account. Looking forward to seeing tonight's build report. On Wed, Jan 2, 2019 at 9:55 AM Turaga, Nitesh <nitesh.tur...@roswellpark.org> wrote: > There is no bridge between GitHub and Bioconductor’s private git server. > > You have to push separately to the Bioconductor’s git server. Based on > your setup, you have to do, > > git push upstream master > > which, pushes to g...@git.bioconductor.org:packages/rgsepd. > > Please let me know if you have done this. > > Once you have done this, check https://bioconductor.org/developers/gitlog/ > to see if you commit is available on that list. > > Best, > > Nitesh > > > > > On Jan 2, 2019, at 10:49 AM, Karl Stamm <karl.st...@gmail.com> wrote: > > > > I think there's a disconnect between the github and the bioconductor > build > > server. I cannot seem to get any updates to go into the Bioc devel > > packages. > > I have added a few things to v1.15.x and the Bioc website still lists me > as > > 1.15.0. > > I have the workstation set up as such > > > > git remote -v > > > > origin g...@github.com:kstammits/rgsepd.git (fetch) > > > > origin g...@github.com:kstammits/rgsepd.git (push) > > > > upstream g...@git.bioconductor.org:packages/rgsepd (fetch) > > > > upstream g...@git.bioconductor.org:packages/rgsepd (push) > > > > and it claims 'everything is up to date' when I try to push. Github shows > > my changes, but they arent going into Bioc. How can I get the two > > connected? > > > > Thanks. > > > > [[alternative HTML version deleted]] > > > > _______________________________________________ > > Bioc-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel