xquartz is already installed on the system and tested that it is functioning properly.
This tends to occur when the Cairo binary has not been built yet for the devel version of R. https://www.mail-archive.com/bioc-devel@r-project.org/msg10538.html From the Cairo landing page, indeed the R-devel MAC binary is not available. https://cran.r-project.org/web/packages/Cairo/index.html This ERROR can be ignored for now and will clear up once the binary becomes available. I will let your reviewer know so this will not hinder your review process on the Single Package Builder. Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Shepherd, Lori <lori.sheph...@roswellpark.org> Sent: Tuesday, December 10, 2019 8:26 AM To: Tiago Lubiana Alves <tiago.lubiana.al...@usp.br>; bioc-devel <bioc-devel@r-project.org> Subject: Re: [Bioc-devel] Cairo dependency problem in the OSX machine Thank you. We will look into it. Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Tiago Lubiana Alves <tiago.lubiana.al...@usp.br> Sent: Monday, December 9, 2019 1:55 PM To: bioc-devel <bioc-devel@r-project.org> Subject: [Bioc-devel] Cairo dependency problem in the OSX machine Hello all, Recently, a package I submitted to Bioconductor failed with an error message in the OS X system. This is the link for the build: http://bioconductor.org/spb_reports/PubScore_buildreport_20191208212325.html#celaya2_buildsrc_anchor The problem was with the Cairo package, which is a dependency of "plotly": https://cran.r-project.org/web/packages/plotly/index.html Stack Overflow says that if I owned the Mac, I should install xquartz, which doesn't come anymore built in the OS X system. Any suggestions of how I can proceed? Best and thanks, Tiago Tiago Lubiana Mestrando em Bioinform�tica, FCF/USP *Computational Systems Biology Laboratory (CSBL)* Telefone (laborat�rio): +55 (11) 2648-0240 Telefone (pessoal): +55 (11) 954258000 [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
