Thanks, Spencer. Sorry I missed the support posting - there’s no automatic forwarding from there to maintainers.
I’ll take a look at this later today, then post back to the support list, and we will get a fix in. Thank you for pointing out the problem! - Paul > On Jun 5, 2020, at 9:46 AM, Nystrom, Spencer <snyst...@email.unc.edu> wrote: > > Hi, > > I've identified a few missing PWMs from the MotifDb package and would like to > help get them added. I posted on the support page but have not received a > response after 10 days, so messaging here instead (link to forum post: > https://support.bioconductor.org/p/131312/). Full details can be found in the > support post, but in summary, there are a small number of Drosophila > transcription factors which do not have any entries in MotifDb, meaning > anyone using that database for their motif analysis will not identify these > factors as potential candidates. A .meme format file > ("flyFactor_Missing_Motifdb.meme") of these missing motifs along with a > reproducible script to identify these factors can be found at this gist: > https://gist.github.com/snystrom/b7701858bec6bc4ce7758a7582422359. I am happy > to help curate any additional metadata required to get these factors added to > the database. > > Best, > -Spencer > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
