Hi Nick, (and the rest of the biohaskellers) I have a small tool that I'd like to put on Hackage - it calculates statistics on insert sizes from bam files, either as a distribution (mu, sigma, skew, kurtosis) or as a histogram of sizes. However, it relies on the 'readBams' function -- i.e. lazy reading all Bam1 records -- I added to the SamTools package (patches darcs-pullable from http://malde.org/~ketil/biohaskell/SamTools).
Did you pull that and include it in SamTools? If so, which version should I depend on? (If you don't like it, I'll just ship it separately.) -k -- If I haven't seen further, it is by standing in the footprints of giants _______________________________________________ Biohaskell mailing list Biohaskell@biohaskell.org http://malde.org/cgi-bin/mailman/listinfo/biohaskell
