On Thu, Jan 10, 2002 at 11:56:32AM -0500, Michael L. Heuer wrote: > Thomas, > > I'm getting a strange error when serving reference sequence from an > EmblDataSource via the /das/[dsn]/dna request. No matter what the dna > query ( dna?segment=ACC, dna?segment=ACC:1,100, ...) I receive the same > index out of range exception. Is this value significant for any reason? > > The entry_points request returns an accurate list, leading me to believe > the sequences were loaded from the embl file correctly. > > I'm using cvs versions of xdas and biojava.
Are these the latest CVS versions? I've just tested this on my box with up-to-date versions, and everything seems to work (both for whole sequences and sub-sequences). It's rather hard to see where the problem is coming from :-(. Just one (rather vague) suggestion. Looking at your stack traces, I think you might be using Tomcat 3.3.x. We've had very bad experiences with this release -- there've been a number of reported problems which have caused a lot of headache, then mysteriously disappeared when the user either upgraded to Tomcat 4.0 or downgraded to 3.2. [For what it's worth, I did my testing today using 4.0.1]. Thomas. _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
