Hi. I've checked in a preliminary taxa implementation to:
org.biojava.bio.taxa There is a demo at: demos/seq/TestSwissprotOrg.java and I've added a seq io object to: org.biojava.bio.seq.io.OrganismParser There is some work to do - I think Taxa instances should be annotatable, and also the stringification API should be split out into a light-weight interface. Anyway, please give me feedback - I've pumped swissprot-40 through it (using both SimpleTaxaFactory and WeakTaxaFactory) and it works for me - anybody feel like pumping Embl through? All the best, Matthew ps The Sequence IO interface rocks! _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
