Thanks Tony, I think that most (if not all) of these errors are mine - that's what you get for trusting a dyslexic with documentation ;-)
Matthew Tony Watkins wrote: > Hi. > > Just some simple errors that I think may be spelling related. Apologies > for it being this shallow, but I don't know anything about > bioinformatics - period. However - I hope these observations prove a > little useful. > > Documentation - > > Overview. > > (original) > "Hopefuly, as the project matures, each of these areas will be fleshed > out. Also, hopefuly we will develop code for:" > > (suggested correction) > *Hopefully*, ... Also, *hopefully* we will ... > > Javadoc - package org.biojava.bio.dist > > Description for DistributionTools appears not to follow the format of > other class summaries. > > (original) > "Title: DistributionTools.java Description: A static class to hold > static methods for calculations and maniputlations using Distributions." > > (suggested correction) > ... and *manipulations* using Distributions. > > package - org.biojava.bio.dp > > class statepath > > (original) > Extends the Alignment interface so that it is explicitly used to > represent a state path through an HMM, and the associated emitted > sequence and likelyhoods. > > (suggested correction) > Extends the Alignment interface so that it is explicitly used to > represent a state path through an HMM, and the associated emitted > sequence and *likelihoods*. > > class BaumWelchTrainer > > (original) > Train a hidden markov model using maximum likelyhood. > > (suggested correction) > Train a hidden markov model using maximum *likelihood*. > > class WMAsMM > > (original) > Wraps a weight matrix up so that it appears to be a very simple hmm. > > (suggested correction) > Wraps a weight matrix up so that it appears to be a very simple HMM. > > > That's all for now... > > > > _______________________________________________ > Biojava-l mailing list - [EMAIL PROTECTED] > http://biojava.org/mailman/listinfo/biojava-l > _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
