Is it possible that you have either a truncated or corrupted version of the biojava source tree? I'm sure we've broken the 1k mark for source files now. We're getting better at hiding them away though ;-)
Try checking the files out again from clean. That may sort things out.
Matthew
David Waring wrote:
I got the following errors when I tried to build biojava-live compile: [javac] Compiling 799 source files to V:\dwaring\cvs\biojava-live\ant-build\ classes\main [javac] V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i o\filterxml\XMLFilterWriterConfig.java:198: interface expected here [javac] private static class BlankFilterWriter implements XMLFilterWrite r { [javac] ^ [javac] V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i o\filterxml\XMLFilterWriterConfig.java:217: interface expected here [javac] private static abstract class PropertyFilterWriter implements XM LFilterWriter { [javac] ^ [javac] V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i o\filterxml\XMLFilterWriterConfig.java:313: interface expected here [javac] private static class AndFilterWriter implements XMLFilterWriter { [javac] ^ [javac] V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i o\filterxml\XMLFilterWriterConfig.java:340: interface expected here [javac] private static class OrFilterWriter implements XMLFilterWriter {[javac] ^ [javac] V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i o\filterxml\XMLFilterWriterConfig.java:112: cannot resolve symbol [javac] symbol : class IsTopLevel [javac] location: interface org.biojava.bio.seq.FeatureFilter [javac] FeatureFilter.IsTopLevel.class, [javac] ^ [javac] V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\seq\i o\filterxml\XMLFilterWriterConfig.java:185: writeFilter(org.biojava.bio.seq.Feat ureFilter,org.biojava.utils.xml.XMLWriter) in org.biojava.bio.seq.io.filterxml.X MLFilterWriter cannot be applied to (org.biojava.bio.seq.FeatureFilter,org.bioja va.utils.xml.XMLWriter,org.biojava.bio.seq.io.filterxml.XMLFilterWriterConfi g) [javac] xfw.writeFilter(ff, xw, this); [javac] ^ [javac] V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\progr am\das\DASMergeFeatureHolder.java:35: cannot resolve symbol [javac] symbol : method getMergeMap () [javac] location: class org.biojava.bio.program.das.DASMergeFeatureHolder [javac] Map mm = getMergeMap(); [javac] ^ [javac] V:\dwaring\cvs\biojava-live\ant-build\src\main\org\biojava\bio\progr am\das\DASMergeFeatureHolder.java:48: cannot resolve symbol [javac] symbol : method getMergeMap () [javac] location: class org.biojava.bio.program.das.DASMergeFeatureHolder [javac] Map mm = getMergeMap(); [javac] ^ [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -deprecation for details. [javac] 8 errors BUILD FAILED file:V:/dwaring/cvs/biojava-live/build.xml:281: Compile failed; see the compiler error output for details. Total time: 1 minute 27 seconds _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
-- BioJava Consulting LTD - Support and training for BioJava http://www.biojava.co.uk __________________________________________________ Do You Yahoo!? Everything you'll ever need on one web page from News and Sport to Email and Music Charts http://uk.my.yahoo.com _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
