hi there
I am using HT-blast for SGI IRIX systems. I have been trying to use BLAST2HTML
program of biojava for my output but I think output genrated is not in the
format that BLAST2HTMl program needs. So i tried to used the code given for
blast parsing at "biojava in anger" webiste. I have been having problem in
understanding and compiling this statement:
SearchContentHandler builder = new BlastLikeSearchBuilder(results,
new DummySequenceDB("queries"), new DummySequenceDBInstallation());
any advice how to understand what this statement is doing and if there is any
errors or any thing need to be change?
please advice.
dinesh
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