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• 2004/06/07 Re: [Biojava-l] reading sequence files mark . schreiber
• 2004/06/07 [Biojava-l] reading sequence files Clemens Steegborn
• 2004/06/07 [Biojava-l] BioJava, BioSQL versions Gang Wu
• 2004/06/07 Re: [Biojava-l] Heat map gradients Patrick McConnell
• 2004/06/07 Re: [Biojava-l] Heat map gradients Thomas Down
• 2004/06/07 Re: [Biojava-l] Heat map gradients Dan Bolser
• 2004/06/07 Re: [Biojava-l] Heat map gradients Dan Bolser
• 2004/06/06 [Biojava-l] Heat map gradients mark . schreiber
• 2004/06/03 RE: [Biojava-l] Genbank ASN.1 or XML parser mark . schreiber
• 2004/06/03 RE: [Biojava-l] Genbank ASN.1 or XML parser Gang Wu
• 2004/06/03 [Biojava-l] Genome Informatics meeting. Ewan Birney
• 2004/06/03 [Biojava-l] Exporting accessions to Genbank files Hoebeke Mark
• 2004/06/02 Re: [Biojava-l] Genbank ASN.1 or XML parser mark . schreiber
• 2004/06/02 [Biojava-l] BioSQL exception Gang Wu
• 2004/06/02 [Biojava-l] Genbank ASN.1 or XML parser Gang Wu
• 2004/06/01 RE: [Biojava-l] Biojava uses which BioSQL shema version ? Alexandre Dionne Laporte
• 2004/05/31 [Biojava-l] BioJava 1.4pre1 Thomas Down
• 2004/05/31 [Biojava-l] Biojava uses which BioSQL shema version ? Alexandre Dionne Laporte
• 2004/05/25 [Biojava-l] Blast2HTML parser problem elenges
• 2004/05/23 [Biojava-l] Re: [Bioperl-l] testing a new Open-Bio website and mail list archive search Hilmar Lapp
• 2004/05/23 Re: [Biojava-l] BioSQL transaction control mark . schreiber
• 2004/05/22 [Biojava-l] Network visualization and biojava? Dan Bolser
• 2004/05/21 Re: [Biojava-l] BioSQL transaction control Thomas Down
• 2004/05/20 [Biojava-l] BioSQL transaction control mark . schreiber
• 2004/05/20 Re: [Biojava-l] SequencePoster <-> SequencePanel Maximilian Haeussler
• 2004/05/20 [Biojava-l] CFP: The Seventh Annual Bio-ontologies Meeting Phillip Lord
• 2004/05/18 Re: CircularLocations (was Re: [Biojava-l] Re: [Biojava-dev] Feature at position 0) mark . schreiber
• 2004/05/15 Re: [Biojava-l] SimpleGappedSymbolList from a String Don Naki
• 2004/05/14 [Biojava-l] Extending the default SAX handlers Tracy, Adam
• 2004/05/14 [Biojava-l] Re: [Biojava-dev] Feature at position 0 Tao Xu
• 2004/05/14 CircularLocations (was Re: [Biojava-l] Re: [Biojava-dev] Feature at position 0) Bradford Powell
• 2004/05/14 [Biojava-l] Re: [Biojava-dev] Feature at position 0 Thomas Down
• 2004/05/14 Re: [Biojava-l] SimpleGappedSymbolList from a String Matthew Pocock
• 2004/05/14 [Biojava-l] Re: [Biojava-dev] Feature at position 0 Matthew Pocock
• 2004/05/13 [Biojava-l] accessing the HSP alignment using biojava Tracy, Adam
• 2004/05/13 [Biojava-l] SimpleGappedSymbolList from a String Don Naki
• 2004/05/13 [Biojava-l] Dazzle 1.01 Thomas Down
• 2004/05/12 Re: [Biojava-l] SequencePoster <-> SequencePanel Kalle Näslund
• 2004/05/11 Re: [Biojava-l] Highlight Features when clicked? newbie Matthew Pocock
• 2004/05/11 [Biojava-l] testing a new Open-Bio website and mail list archive search Chris Dagdigian
• 2004/05/11 [Biojava-l] Highlight Features when clicked? newbie Maximilian Haeussler
• 2004/05/11 Re: [Biojava-l] Why is FramedFeature.Template.readingFrame static? Thomas Down
• 2004/05/10 [Biojava-l] {off topic} Apple is giving away 5 workgroup sized clusters in a program for bioinformatics researchers Chris Dagdigian
• 2004/05/10 Re: [Biojava-l] Why is FramedFeature.Template.readingFrame static? Thomas Down
• 2004/05/10 [Biojava-l] Why is FramedFeature.Template.readingFrame static? Bradford Powell
• 2004/05/07 [Biojava-l] Locations in centiMorgans VERHOEF Frans
• 2004/05/07 Re: [Biojava-l] SequencePoster <-> SequencePanel Kalle Näslund
• 2004/05/06 Re: [Biojava-l] SequencePoster <-> SequencePanel Matthew Pocock
• 2004/05/06 [Biojava-l] SequencePoster <-> SequencePanel Maximilian Haeussler
• 2004/05/05 [Biojava-l] Alignment/ Alphabet issues (was biojava v2 alpha1 release) mark . schreiber
• 2004/05/05 RE: [Biojava-l] Website updates VERHOEF Frans
• 2004/05/05 Re: [Biojava-l] Website updates Thomas Down
• 2004/05/05 [Biojava-l] Website updates Thomas Down
• 2004/05/05 [Biojava-l] Biojava goes 3D Andreas Prlic
• 2004/04/29 [Biojava-l] BOSC 2nd Call For Papers (fwd) Darin London
• 2004/04/26 [Biojava-l] biojava survey Matthew Pocock
• 2004/04/23 Re: [Fwd: Re: [Biojava-l] Displaying many SequencePanels Kalle Näslund
• 2004/04/22 Re: [Fwd: Re: [Biojava-l] Displaying many SequencePanels Maximilian Haeussler
• 2004/04/15 [Biojava-l] Bioinfo book review Smithies, Russell
• 2004/04/13 [Biojava-l] bioperl graph - different glyph on the same track hz5
• 2004/04/13 [Biojava-l] blast parser alignment middle line Christian Gruber
• 2004/04/12 [Biojava-l] Re: Speed TranslatedSequenceRenderer Maximilian Haeussler
• 2004/04/12 Re: [Biojava-l] LabelledSequenceRenderer: OutofBounds exception on window resize Maximilian Haeussler
• 2004/04/12 RE: [Biojava-l] How to pull out the detailed information in Genbankfeature table Gang Wu
• 2004/04/12 [Biojava-l] How to pull out the detailed information in Genbank feature table Gang Wu
• 2004/04/08 [Biojava-l] Problem parsing Genbank files Fenger, Doug
• 2004/04/08 [Biojava-l] RestrictionEnzymeManager Khalil El Mazouari
• 2004/04/07 RE: [Biojava-l] Blast Parser oddity Wiepert, Mathieu
• 2004/04/02 [Biojava-l] Blast Parser oddity Christian Gruber
• 2004/04/02 Re: [Biojava-l] Parsing GenBank files in Threads Hoebeke Mark
• 2004/04/02 Re: [Biojava-l] Anybody working on a Java binding to CHADO? David Huen
• 2004/04/02 [Biojava-l] Anybody working on a Java binding to CHADO? Richard Bruskiewich
• 2004/04/01 Re: [Biojava-l] Parsing GenBank files in Threads Hoebeke Mark
• 2004/04/01 Re: [Biojava-l] Parsing GenBank files in Threads Matthew Pocock
• 2004/04/01 [Biojava-l] Dazzle 1.00 release Thomas Down
• 2004/04/01 [Biojava-l] Parsing GenBank files in Threads Hoebeke Mark
• 2004/03/30 [Fwd: Re: [Biojava-l] LabelledSequenceRenderer does not work with TranslatedSequenceRenderer, Newbie] Kalle Näslund
• 2004/03/29 [Biojava-l] how to get renderer in SequencePanel Magic Fang
• 2004/03/26 Re: [Biojava-l] what is the design goal of biojava? Matthew Pocock
• 2004/03/26 Re: [Biojava-l] LabelledSequenceRenderer does not work with TranslatedSequenceRenderer, Newbie Keith James
• 2004/03/26 Re: [Biojava-l] what is the design goal of biojava? mark . schreiber
• 2004/03/25 [Biojava-l] what is the design goal of biojava? Magic Fang
• 2004/03/25 Re: [Biojava-l] is there a biojava class diagram? like bioperl diagram mark . schreiber
• 2004/03/25 Re: [Biojava-l] LabelledSequenceRenderer does not work with TranslatedSequenceRenderer, Newbie David Huen
• 2004/03/25 Re: [Biojava-l] LabelledSequenceRenderer does not work with TranslatedSequenceRenderer, Newbie Keith James
• 2004/03/25 Re: [Biojava-l] LabelledSequenceRenderer does not work with TranslatedSequenceRenderer, Newbie Matthew Pocock
• 2004/03/25 Re: [Biojava-l] LabelledSequenceRenderer does not work with TranslatedSequenceRenderer, Newbie Matthew Pocock
• 2004/03/25 Re: [Biojava-l] LabelledSequenceRenderer does not work with TranslatedSequenceRenderer, Newbie Kalle Näslund
• 2004/03/25 [Biojava-l] biojava script? Dan Bolser
• 2004/03/25 [Biojava-l] LabelledSequenceRenderer does not work with TranslatedSequenceRenderer, Newbie Maximilian Haeussler
• 2004/03/23 [Biojava-l] cvs.biojava.org down? Christian Gruber
• 2004/03/22 Re: [Biojava-l] is blast parser flawed? mark . schreiber
• 2004/03/22 [Biojava-l] is blast parser flawed? Magic Fang
• 2004/03/22 Re: [Biojava-l] Missing ProcessTools class mark . schreiber
• 2004/03/22 [Biojava-l] Missing ProcessTools class Christian Gruber
• 2004/03/21 [Biojava-l] BioJava mentioned in 'on java' article mark . schreiber
• 2004/03/19 Re: [Biojava-l] yes, something like this Michael Heuer
• 2004/03/19 Re: [Biojava-l] yes, something like this Magic Fang
• 2004/03/19 Re: [Biojava-l] yes, something like this Michael Heuer
• 2004/03/19 Re: [Biojava-l] yes, something like this Matthew Pocock
• 2004/03/19 Re: [Biojava-l] yes, something like this mark . schreiber
• 2004/03/18 [Biojava-l] yes, something like this Magic Fang
• 2004/03/18 [Biojava-l] is there a biojava class diagram? like bioperl diagram Magic Fang
• 2004/03/12 Re: [Biojava-l] BlastXMLParserFacade Thomas Down
• 2004/03/12 Re: [Biojava-l] BlastXMLParserFacade Dan Bolser
• 2004/03/12 Re: [Biojava-l] BlastXMLParserFacade David Huen
• 2004/03/12 Re: [Biojava-l] BlastXMLParserFacade Matthew Pocock
• 2004/03/12 Re: [Biojava-l] Parameter Settings in BaumWelchTraining] Thomas Down
• 2004/03/12 Re: [Biojava-l] Parameter Settings in BaumWelchTraining] mark . schreiber
• 2004/03/12 Re: [Biojava-l] Parameter Settings in BaumWelchTraining] Dan Bolser
• 2004/03/11 Re: [Biojava-l] Parameter Settings in BaumWelchTraining] mark . schreiber
• 2004/03/11 Re: [Biojava-l] Parameter Settings in BaumWelchTraining] sacoca
• 2004/03/11 Re: [Biojava-l] Parameter Settings in BaumWelchTraining sacoca
• 2004/03/11 Re: [Biojava-l] Parameter Settings in BaumWelchTraining mark . schreiber
• 2004/03/11 [Biojava-l] Parameter Settings in BaumWelchTraining sacoca
• 2004/03/11 [Biojava-l] BlastXMLParserFacade DMGoodstein
• 2004/03/10 [Biojava-l] O|B|F mail update -- making progress on anti-spam issues with our mailing lists Chris Dagdigian
• 2004/03/10 [Biojava-l] BJIA updates mark . schreiber
• 2004/03/08 Re: [Biojava-l] Reading frames and amino acids David Huen
• 2004/03/08 RE: [Biojava-l] Reading frames and amino acids Jellema, Gera
• 2004/03/07 Re: [Biojava-l] Reading frames and amino acids mark . schreiber
• 2004/03/05 [Biojava-l] Reading frames and amino acids facemann
• 2004/03/05 Re: [Biojava-l] Reading frames and amino acids mark . schreiber
• 2004/03/05 Re: [Biojava-l] Reading frames and amino acids Dan Bolser
• 2004/03/04 Re: [Biojava-l] Reading frames and amino acids mark . schreiber
• 2004/03/04 [Biojava-l] Reading frames and amino acids Jellema, Gera
• 2004/03/04 [Biojava-l] NPE from FlatModel.<init> with SimpleModelInState Douglas Hoen
• 2004/03/01 [Biojava-l] Biojava development help needed? Sulatycki Rohini
• 2004/03/01 Re: [Biojava-l] Bug in biojava GUI? Matthew Pocock
• 2004/02/29 Re: [Biojava-l] Intsall Problems Update mark . schreiber
• 2004/02/29 Re: [Biojava-l] Hard Times using File Inputs for HMM Package mark . schreiber
• 2004/02/29 [Biojava-l] Bug in biojava GUI? w...@mail.cbi.pku.edu.cn
• 2004/02/28 Re: [Biojava-l] Intsall Problems Update Orion Hunter
• 2004/02/28 [Biojava-l] Hard Times using File Inputs for HMM Package sacoca
• 2004/02/28 Re: [Biojava-l] Intsall Problems Update David Huen
• 2004/02/27 RE: [Biojava-l] Intsall Problems Update Orion Hunter
• 2004/02/27 RE: [Biojava-l] Intsall Problems Orion Hunter
• 2004/02/27 [Biojava-l] Intsall Problems Orion Hunter
• 2004/02/27 Re: [Biojava-l] ask help in biojava GUI Matthew Pocock
• 2004/02/27 Re: [Biojava-l] ask help in biojava GUI Keith James
• 2004/02/26 [Biojava-l] ask help in biojava GUI w...@mail.cbi.pku.edu.cn
• 2004/02/26 [Biojava-l] how to make a subsequence serializable? Alberto Ambesi
• 2004/02/26 Re: [Biojava-l] how to make a subsequence serializable? mark . schreiber
• 2004/02/17 [Biojava-l] Serialization of RemoteFeature.Region Vasa Curcin
• 2004/02/16 Re: [Biojava-l] DNA 'weak' comparison mark . schreiber
• 2004/02/16 [Biojava-l] DNA 'weak' comparison Jan Würthner
• 2004/02/15 Re: [Biojava-l] can i download the demos code, the tutorial is somewhat limited mark . schreiber
• 2004/02/15 [Biojava-l] can i download the demos code, the tutorial is somewhat limited Magic Fang
• 2004/02/12 Re: [Biojava-l] removeGap problem with SimpleGappedSequence david de beule
• 2004/02/12 Re: [Biojava-l] removeGap problem with SimpleGappedSequence Matthew Pocock
• 2004/02/12 Re: [Biojava-l] removeGap problem with SimpleGappedSequence mark . schreiber
• 2004/02/12 Re: [Biojava-l] removeGap problem with SimpleGappedSequence daviddebeule
• 2004/02/11 Re: [Biojava-l] removeGap problem with SimpleGappedSequence mark . schreiber
• 2004/02/11 [Biojava-l] removeGap problem with SimpleGappedSequence david de beule
• 2004/02/11 [Biojava-l] Experience with Phred base calling on Beckman CEQ 2000? david atlan (PHENO)
• 2004/02/08 Re: [Biojava-l] 2 problems found in org.biojava.bio.seq.db.biosql code Len Trigg
• 2004/02/08 Re: [Biojava-l] 2 problems found in org.biojava.bio.seq.db.biosql code mark . schreiber
• 2004/02/08 Re: [Biojava-l] 2 problems found in org.biojava.bio.seq.db.biosql code Len Trigg
• 2004/02/05 RE: [Biojava-l] beginners bug fileToBiojava problem with msf format VERHOEF Frans
• 2004/02/04 Re: [Biojava-l] BLASTLikeSAXParser and HMMER mark . schreiber
• 2004/02/04 Re: [Biojava-l] TMTOWTDI in biojava? mark . schreiber
• 2004/02/04 [Biojava-l] BLASTLikeSAXParser and HMMER Iris Pallida
• 2004/02/04 Re: [Biojava-l] beginners bug fileToBiojava problem with msf format Keith James
• 2004/02/04 Re: [Biojava-l] beginners bug fileToBiojava problem with msf format Keith James
• 2004/02/04 Re: [Biojava-l] Run blast on multiple databases Patrick McConnell
• 2004/02/04 [Biojava-l] TMTOWTDI in biojava? Dan Bolser
• 2004/02/04 [Biojava-l] Run blast on multiple databases Laurence Hummel
• 2004/02/04 [Biojava-l] blast on multiple databases Laurence Hummel
• 2004/02/04 Re: [Biojava-l] beginners bug fileToBiojava problem with msf format Dan Bolser
• 2004/02/04 Re: [Biojava-l] beginners bug fileToBiojava problem with msf format Keith James
• 2004/02/04 Re: [Biojava-l] beginners bug fileToBiojava problem with msf format Dan Bolser
• 2004/02/04 Re: [Biojava-l] tipical dumb user problem (BUILD FAILED) Dan Bolser
• 2004/02/04 Re: [Biojava-l] tipical dumb user problem (BUILD FAILED) Thomas Down
• 2004/02/04 [Biojava-l] tipical dumb user problem (BUILD FAILED) Dan Bolser
• 2004/02/04 [Biojava-l] beginners bug fileToBiojava problem with msf format Dan Bolser
• 2004/02/03 Re: [Biojava-l] Uppercase/lowercase sequences mark . schreiber
• 2004/02/03 [Biojava-l] Uppercase/lowercase sequences Maik Hassel
• 2004/01/31 Hello biojava-l
• 2004/01/29 Re: [Biojava-l] creating a sequence... Jan Würthner
• 2004/01/29 [Biojava-l] creating a sequence... Jan Würthner
• 2004/01/27 [Biojava-l] 2 problems found in org.biojava.bio.seq.db.biosql code Frederik Decouttere
• 2004/01/27 Re: [Biojava-l] GenBank Feature Extraction Toralf Kirsten
• 2004/01/27 Re: [Biojava-l] GenBank Feature Extraction mark . schreiber
• 2004/01/27 [Biojava-l] GenBank Feature Extraction Toralf Kirsten
• 2004/01/26 hcmv biojava-l
• 2004/01/23 Re: [Biojava-l] GenBank XML File Parse Error Toralf Kirsten
• 2004/01/23 Re: [Biojava-l] GenBank XML File Parse Error Thomas Down
• 2004/01/23 [Biojava-l] GenBank XML File Parse Error Toralf Kirsten
• 2004/01/18 [Biojava-l] Blast XML output question tai kwan do
• 2004/01/14 Re: [Biojava-l] ClassCastException during ambiguity calcul mark . schreiber
• 2004/01/14 [Biojava-l] ClassCastException during ambiguity calcul Eric BELLARD
• 2004/01/14 [Biojava-l] Non-Deterministic behaviour of the FeatureFilter-Walker !? Benjamin Schuster-Boeckler
• 2004/01/14 Re: [Biojava-l] how to calculate consensus from a fasta file Eric BELLARD
• 2004/01/13 Re: [Biojava-l] how to calculate consensus from a fasta file mark . schreiber
• 2004/01/13 [Biojava-l] how to calculate consensus from a fasta file Eric BELLARD
• 2004/01/12 Re: [Biojava-l] Is there a way to determine the query within a FeatureFilter? Matthew Pocock
• 2004/01/12 Re: [Biojava-l] seqString() produces stacktrace Matthew Pocock
• 2004/01/11 Re: [Biojava-l] seqString() produces stacktrace mark . schreiber
• 2004/01/11 Re: [Biojava-l] wanted info ! mark . schreiber
• 2004/01/10 [Biojava-l] wanted info ! karla suri nath

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