Hi, I am parsing in RNA sequence data. One of the positions has a 'R' which stands for the ambiguity symbol A or G. However, the RNA alphabet does not have this as a token for anything (I did a quick test, and the ambiguity token for A or G is N). So the genbank reader falls over when it gets to this.
Any suggestions on how to handle this? Can we modify the symbol tokenization for RNA to cope with this case? Thanks a lot, Lachlan _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
