Hi, I would be glad to write the parser. Since I am pretty new to BioJava project, can anybody give me a guide on how to start? Thanks.
- Gang -----Original Message----- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] Sent: Wednesday, June 02, 2004 8:59 PM To: [EMAIL PROTECTED] Cc: Bio-Java; [EMAIL PROTECTED] Subject: Re: [Biojava-l] Genbank ASN.1 or XML parser Hello - At the moment there are no parsers for XEMBL, GenBankXML or ASN.1, They could both be easily made if someone had that time. GenBankXML could easily draw on a SAX or DOM parser to pass events to the BioJava SequenceBuilders (using some kind of adapter). ASN.1 would need a more custom parser but because it is highly structured that shouldn't be too hard. Any volunteers? - Mark "Gang Wu" <[EMAIL PROTECTED]> Sent by: [EMAIL PROTECTED] 06/02/2004 11:21 PM Please respond to gwu To: "Bio-Java" <[EMAIL PROTECTED]> cc: Subject: [Biojava-l] Genbank ASN.1 or XML parser Hi everyone, I just tried out the APIs for parsing Genbank format files. Though it works well, I still wonder if there are APIs for parsing Genbank files in ASN.1 or XML formats because the Genbank format was designed for human being and the ASN.1 and XML formats should be more reliable for data exchange. Gang Wu _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
