Hello all - There have been some recent updates to BioJava in Anger. There is a link under 'Publications' that will search the new Google Scholar site for references to BioJava.
There is a new tutorial on how to make a custom SearchContentHandler (http://www.biojava.org/docs/bj_in_anger/blastecho.htm) which shows which part of the blast parsing process are emmitted as what type of events and also gives some clues on how you would make a parser that can handle very large files or a parser that only cares about a small subset of information. Finally there is a tutorial on how to set up Biojava and BioSQL using Oracle (http://www.biojava.org/docs/bj_in_anger/bj_and_bsql_oracle_howto.htm). Credit for this page goes to Richard Holland from the Genome Institute in Singapore. There will probably be a few more additions over the next few days. Enjoy... Mark Schreiber Principal Scientist (Bioinformatics) Novartis Institute for Tropical Diseases (NITD) 10 Biopolis Road #05-01 Chromos Singapore 138670 www.nitd.novartis.com phone +65 6722 2973 fax +65 6722 2910 _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
