[Biojava-l] Adapting org.biojava.bio.seq classes to an interface?

Thu, 16 Dec 2004 04:34:00 -0800

Is there a way of adapting org.biojava.bio.seq classes / interfaces to an interface?

I would like to add functionality to some of the interfaces in org.biojava.bio.seq, i.e. sequence and feature, by adapting them to an existing interface.

I see two possibilites - a class adapter:

OwnSequence extends SimpleSequence implements NewFunctionality

or an object Adapter:

OwnSequence implements Sequence, NewFunctionality

Unfortunately both approaches would mean massive recoding of the parsing /building process of sequence-objects, so that in essence it would be simpler for me to write my own classes to handle sequences.

Anyone an idea?

Cheers,
Christian


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