Hi - I am new to biojava and am trying to get it set up on Red Hat EE 3
running on a PC. I have java 1.4.2 and jdk1.4.2.0 installed.
I downloaded the necessary jar files (biojava1.4.jar, bytecode-0.92.jar,
commons-cli.jar, commons-collections-2.1.jar, commons-dbcp-1.1.jar,
commons-pool-1.1.jar) and placed them a /homes/trodkey/biojava directory
as per the "Getting Started" section.
I then fixed the classpath variable to "setenv CLASSPATH
/homes/trodkey/biojava/biojava-1.4.jar:/homes/trodkey/biojava/bytecode-0.92.jar:
/homes/trodkey/biojava/commons-cli.jar:/homes/trodkey/biojava/commons-collections-2.1.jar:
/homes/trodkey/biojava/commons-dbcp-1.1.jar:/homes/trodkey/biojava/commons-pool-1.1.jar:."
as per the instructions.
I then tried to compile TestEmbl.java as suggested in the "Getting
Started" section by using "javac
/homes/trodkey/biojava/demos/seq/TestEmbl.java", and got the error
"/homes/trodkey/biojava/demos/seq/TestEmbl.java:5: package
homes.trodkey.biojava.org.biojava.bio does not exist", which was the
first of a string of 15 errors.
Can anyone help me out?
Thanks!
-Travis Rodkey
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