the easiest way is to put the jar files to the jdkxxx/jre/lib/extU may have to 
link them to your jre's same directory (shuld u use differentjre then the jdk's)
On 11/30/05, Travis Rodkey <[EMAIL PROTECTED]> wrote:>> Hi - I am new to 
biojava and am trying to get it set up on Red Hat EE 3> running on a PC.   I 
have java 1.4.2 and jdk1.4.2.0 installed.>> I downloaded the necessary jar 
files (biojava1.4.jar, bytecode-0.92.jar,> commons-cli.jar, 
commons-collections-2.1.jar, commons-dbcp-1.1.jar,> commons-pool-1.1.jar) and 
placed them a /homes/trodkey/biojava directory> as per the "Getting Started" 
section.>> I then fixed the classpath variable to "setenv CLASSPATH> 
/homes/trodkey/biojava/biojava-> 
1.4.jar:/homes/trodkey/biojava/bytecode-0.92.jar:> 
/homes/trodkey/biojava/commons-> 
cli.jar:/homes/trodkey/biojava/commons-collections-2.1.jar:> 
/homes/trodkey/biojava/commons-> 
dbcp-1.1.jar:/homes/trodkey/biojava/commons-pool-1.1.jar:."> as per the 
instructions.>> I then tried to compile TestEmbl.java as suggested in the 
"Getting> Started" section by using "javac> 
/homes/trodkey/biojava/demos/seq/TestEmbl.java", and got the error>> 
"/homes/tro!
dkey/biojava/demos/seq/TestEmbl.java:5: package> 
homes.trodkey.biojava.org.biojava.bio does not exist", which was the> first of 
a string of 15 errors.>> Can anyone help me out?>> Thanks!>> -Travis Rodkey>> 
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