Hi Mark,
Ok. I´ll test it, thanks.
Curious? :) ... I´m testing somethings about progressive alignment,
because I dont´t found how to do Multiple Sequence Aligments (MSA) using
with only Biojava. I´m wrong?
I make some tests with strap but it´s not what I need. Have you any
suggestion about MSA with BioJava?
Thanks all!
[EMAIL PROTECTED] escreveu:
Hi -
I think the DP class should accept a GappedSequence. To get the result you
want you will probably need to have at least one match state that can emit
gaps. I'm curious to know why you would want to do that kind of alignment
though?
- Mark
_______________________________________________
Biojava-l mailing list - Biojava-l@biojava.org
http://biojava.org/mailman/listinfo/biojava-l
