I've already found the answer to my question which seems to work in previous archives (§June 2006).
This archive suggests to replace : BlastLikeSAXParser parser = new BlastLikeSAXParser(); By : BlastXMLParserFacade parser = new BlastXMLParserFacade(); And this seems to work well. So sorry for having posted a bit quickly. Regards, Benoît Varvenne, Bioinformatics pearson in charge, Genoway Lyon (France). Le 6/11/06 13:57, « Benoit VARVENNE » <[EMAIL PROTECTED]> a écrit : > Hello, > > I'm a new user of biojava and i'm trying to use it to parse blast results > (against NCBI nr database). I've tried to do so using biojava1.4 and > biojava1.5-beta but none of these seem to support the latest Blast version. > > I'd be very greatful to you if anyone could help me with that... > > Thanks, > Best regards, > > Benoit Varvenne, > Bioinformatics pearson in charge, > Genoway Lyon (France). > > > _______________________________________________ > Biojava-l mailing list - [email protected] > http://lists.open-bio.org/mailman/listinfo/biojava-l > _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
