The latest checkout from BioJava CVS can now be digitally signed. This is optional.
try the following: ant clean; ant sign; jarsigner -verify ant-build/biojava.jar Andreas On 29 Jun 2007, at 12:50, Mark Schreiber wrote: > By we, do you mean you? > > : ) > > On 6/29/07, Andreas Prlic <[EMAIL PROTECTED]> wrote: >> we could provide an ant task that would sign it and the default would >> be not to have it signed. >> >> Andreas >> >> >> On 29 Jun 2007, at 09:49, Mark Schreiber wrote: >> >> > In this case then maybe the best solution is to provide a "How to >> sign >> > your biojava.jar" page on the wiki. >> > >> > Possibly it could go into a "How to make a BioJava empowered Applet" >> > recipe for the cookbook. Does anyone feel motivated to provide a >> > trivial (or even not so trivial) example? >> > >> > - Mark >> > >> > On 6/29/07, Andy Yates <[EMAIL PROTECTED]> wrote: >> >> Hey, >> >> >> >> Normally digitally signing a jar can cause problems for people who >> >> want >> >> to uncompress our jar & re-compress into a distribution for >> themselves >> >> (a one shot executable jar scenario). Applets are very strange as >> I'm >> >> sure it's possible to load resources from the server and applet is >> >> created from (I did it ages ago for an applet which worked with >> blast >> >> output). So it's a bit of a shock that the applet sandbox doesn't >> >> allow >> >> us to call a getResourceAsStream() method (well I say surprise ... >> it >> >> doesn't really). >> >> >> >> It's probably not a bad thing to offer a digitally signed version >> of >> >> the >> >> JAR for people wanting to use it in applets but if the main >> >> distribution >> >> could continue with unsigned JARs I think that would be the best. >> >> >> >> Andy >> >> >> >> Mark Schreiber wrote: >> >> > Hi - >> >> > >> >> > Is there any reason why we shouldn't digitally sign the >> biojava.jar >> >> as >> >> > part of our distribution? It would save other people doing it. >> >> > >> >> > I think we would just use a self generated certificate as a third >> >> > party one is expensive and doesn't really proove anything anyway. >> >> > >> >> > Just a thought, >> >> > >> >> > - Mark >> >> > >> >> > On 6/28/07, Andreas Prlic <[EMAIL PROTECTED]> wrote: >> >> >> Did you try signing your applet using jarsigner? >> >> >> >> >> >> e.g. see >> >> >> http://www.raditha.com/java/sandbox/index.php >> >> >> >> >> >> Andreas >> >> >> >> >> >> >> >> >>> Kavita Agarwal wrote: >> >> >>>> hi! >> >> >>>> >> >> >>>> I have downloaded the latest version of biojava and i have >> >> included >> >> >>>> all >> >> >>>> the jar files in the >> >> >>>> >> >> >>>> (java home)/jre/lib/ext folder. Problem is that my code runs >> >> fine >> >> >>>> when >> >> >>>> I run it in an application but it is not working in the >> applet. >> >> >>>> >> >> >>>> One thing which I have noticed is that functions defined in >> >> DNATools >> >> >>>> are >> >> >>>> static and I am calling a static function from a non-static >> one >> >> , is >> >> >>>> this any bug? >> >> >>>> >> >> >>>> Thanks a lot for ur reply. >> >> >>>> >> >> >>>> >> >> >> ---------------------------------------------------------------------- >> >> >>>> -- >> >> >>>> Sick sense of humor? Visit Yahoo! TV's Comedy with an Edge >> >> >>>> >> >> <http://us.rd.yahoo.com/evt=47093/*http://tv.yahoo.com/collections/ >> >> >>>> 222>to >> >> >>>> see what's on, when. >> >> >>> -----BEGIN PGP SIGNATURE----- >> >> >>> Version: GnuPG v1.4.2.2 (GNU/Linux) >> >> >>> Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org >> >> >>> >> >> >>> >> iD8DBQFGg4Pi4C5LeMEKA/QRArpHAJ91uzlAlJ0qeTMiRMtWahdT5TCYVACeKpVh >> >> >>> 6hY3O3WqoZT85IqqdBBhsXI= >> >> >>> =3NlO >> >> >>> -----END PGP SIGNATURE----- >> >> >>> _______________________________________________ >> >> >>> Biojava-l mailing list - [email protected] >> >> >>> http://lists.open-bio.org/mailman/listinfo/biojava-l >> >> >>> >> >> >>> >> >> >> >> >> >> ---------------------------------------------------------------------- >> >> - >> >> >> >> >> >> Andreas Prlic Wellcome Trust Sanger Institute >> >> >> Hinxton, Cambridge CB10 1SA, UK >> >> >> +44 (0) 1223 49 6891 >> >> >> >> >> >> >> >> >> ---------------------------------------------------------------------- >> >> - >> >> >> >> >> >> >> >> >> >> >> >> -- >> >> >> The Wellcome Trust Sanger Institute is operated by Genome >> Research >> >> >> Limited, a charity registered in England with number 1021457 >> and a >> >> >> company registered in England with number 2742969, whose >> registered >> >> >> office is 215 Euston Road, London, NW1 2BE. >> >> >> _______________________________________________ >> >> >> Biojava-l mailing list - [email protected] >> >> >> http://lists.open-bio.org/mailman/listinfo/biojava-l >> >> >> >> >> > _______________________________________________ >> >> > Biojava-l mailing list - [email protected] >> >> > http://lists.open-bio.org/mailman/listinfo/biojava-l >> >> >> > >> > >> ---------------------------------------------------------------------- >> - >> >> Andreas Prlic Wellcome Trust Sanger Institute >> Hinxton, Cambridge CB10 1SA, UK >> +44 (0) 1223 49 6891 >> >> ---------------------------------------------------------------------- >> - >> >> >> >> -- >> The Wellcome Trust Sanger Institute is operated by Genome Research >> Limited, a charity registered in England with number 1021457 and a >> company registered in England with number 2742969, whose registered >> office is 215 Euston Road, London, NW1 2BE. >> > > ----------------------------------------------------------------------- Andreas Prlic Wellcome Trust Sanger Institute Hinxton, Cambridge CB10 1SA, UK +44 (0) 1223 49 6891 ----------------------------------------------------------------------- -- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE. _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
