2009/11/2 Richard Holland <[email protected]>: > In the meantime, the JGraph library which is used for displaying JGraphT > graphs in a visual form does include root-finding methods, so maybe you > could investigate there to see if any of the existing functions might help?
Did that. None can help as the graph is not directed (it would be trivial with a directed graph ,of course). In the current form, the nexus parser is of limited use for tree information: 1. For rooted trees it has a bug has it doesn't say what is the root 2. For unrooted trees, sometimes the "root" (what the user perceives as root) is interesting information. Tiago _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
