Hi Donna and John,
The surface I generated was from SureFit (not caret5), and I specified the
cuts in SureFit, but am re-making the partial hemisphere in caret5 to get a
CUT.FACE file.
Donna....the error was preventing me from proceeding with the flattening
(which was never initiated)....so I uploaded my dataset, it's called
Rishifordonna.tar.
So, I'm in the midst of correcting errors in my newly made surface (caret5)
and will try to flatten thereafter....I'll let you know if I get the error
again....any suggestions in the meantime would be great. thanks
rishi
<BLOCKQUOTE style='PADDING-LEFT: 5px; MARGIN-LEFT: 5px; BORDER-LEFT: #A0C6E5
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From: <i>John Harwell <[EMAIL PROTECTED]></i><br>To:
<i>"Caret, SureFit, and SuMS software users"
<caret-users@brainvis.wustl.edu></i><br>CC: <i>Rishi Kalwani
<[EMAIL PROTECTED]></i><br>Subject: <i>Re: [caret-users] Error:
Paint Names not in Paint File</i><br>Date: <i>Mon, 7 Nov 2005 09:28:59
-0600</i><br>>Hi Rishi,<br>><br>>When segmenting a partial
hemisphere, it is necessary to identify <br>>the location of the cut that
separates the partial hemisphere from <br>>the remained of the cortex so
that "padding" may be added. You will <br>>need to load your
segmentation volume and start the segmentation <br>>process with the
input volume being your segmentation volume. On <br>>the Segmentation
Operations page, make sure Automatic Error <br>>Correction is NOT
selected. Sometime after pressing the Next button <br>>the Partial
Hemisphere Padding Dialog will pop up. Check the <br>>"Negative Y
(Posterior)" box since you are processing (I believe) a <br>>frontal
lobe. This will artificially extend the frontal lobe so <br>>that it can
be flattened. When a surface is generated, the paint <br>>file will
identify this artificial extension as "CUT.FACE". When
<br>>you get the error message about "Paint Names are not in Paint
File", <br>>this is due to the CUT.FACE nodes not being
found.<br>><br>>----------------------------------------------------------<br>>John
Harwell<br>>[EMAIL PROTECTED]<br>>314-362-3467<br>><br>>Department
of Anatomy and Neurobiology<br>>Washington University School of
Medicine<br>>660 S. Euclid Ave. Box 8108<br>>St. Louis, MO 63110
USA<br>><br>>On Nov 5, 2005, at 9:57 AM, Rishi Kalwani
wrote:<br>><br>>>Hi,<br>>>So I'm trying to Flatten a Partial
Hemisphere (a frontal cortex, <br>>>Type: Ellipsoid) in caret5 and am
running into the following error:<br>>><br>>>Paint Names are not
in Paint File<br>>><br>>>This is before it even begins to
flatten. I looked at the <br>>>geography.paint file loaded and the
tag-number-of-paint-names is 6, <br>>>and they are as
follows.<br>>><br>>>0 ???<br>>>1 SUL<br>>>2
CENTRAL<br>>>3 DEEP_SUL<br>>>4 CALCARINE<br>>>5
GYRAL<br>>><br>>>Assuming that these are the appropriate and
sufficient number of <br>>>paint names, I don't know why I get this
error......Any suggestions <br>>>for what I might edit?
thanks<br>>><br>>>Rishi<br>>><br>>><br>>>_______________________________________________<br>>>caret-users
mailing
list<br>>>caret-users@brainvis.wustl.edu<br>>>http://pulvinar.wustl.edu/mailman/listinfo/caret-users<br>>><br>><br></font></BLOCKQUOTE>
